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Cell migration plays a fundamental role in numerous physiological processes, including embryonic development, wound healing, and cancer metastasis. While cell-cell adhesion is known to regulate motion by shaping cell morphology and…

生物物理 · 物理学 2026-03-09 Anh Q. Nguyen , Pradip K. Bera , Jacob Notbohm , Dapeng Bi

Eukaryotic transcription generally occurs in bursts of activity lasting minutes to hours; however, state-of-the-art measurements have revealed that many of the molecular processes that underlie bursting, such as transcription factor binding…

亚细胞过程 · 定量生物学 2020-12-21 Nicholas C. Lammers , Yang Joon Kim , Jiaxi Zhao , Hernan G. Garcia

Cells are modeled with spherical grains connected each other. Each cell can shrink and swell by transporting its fluid content to other connected neighbor while still maintaining its density at constant value. As a spherical part of a cell…

生物物理 · 物理学 2014-02-27 Sparisoma Viridi , Nuning Nuraini

Motility is an essential factor for an organism's survival and diversification. With the advent of novel single-cell technologies, analytical frameworks and theoretical methods, we can begin to probe the complex lives of microscopic motile…

Partitioning of (bio)materials in polymeric mixtures is a key phenomenon both in cellular environments, as well as in industrial applications. In cells, several macromolecules are suspended within different biomolecular phases. On the other…

软凝聚态物质 · 物理学 2025-10-15 Vikki Anand Varma , Alberto Scacchi

Molecular dynamics simulations are used to study a unique expanded jammed state. Tension transforms many glassy polymers from a dense glass to a network of fibrils and voids called a craze. Entanglements between polymers and interchain…

软凝聚态物质 · 物理学 2009-11-07 Jörg Rottler , Mark O. Robbins

The term active matter describes diverse systems, spanning macroscopic (e.g. shoals of fish and flocks of birds) to microscopic scales (e.g. migrating cells, motile bacteria and gels formed through the interaction of nanoscale molecular…

软凝聚态物质 · 物理学 2010-03-11 Gautam I. Menon

Motility is characteristic of life, but a common basis for movement has remained to be identified. Diverse systems in motion shift between two states depending on interactions that turnover at the rate of an applied cycle of force. Although…

亚细胞过程 · 定量生物学 2015-11-03 Henry G. Zot , Javier E. Hasbun , Nguyen Van Minh

A novel theory for cell differentiation is proposed, based on simulations with interacting artificial cells which have metabolic networks within, and divide into two when the final product is accumulated. Results of simulations with coupled…

adap-org · 物理学 2015-06-30 Kunihiko Kaneko , Tetsuya Yomo

Granular materials jam when developing a network of contact forces able to resist the applied stresses. Through numerical simulations of the dynamics of the jamming process, we show that the jamming transition does not occur when the…

Jamming occurs when objects like grains are packed tightly together (e.g. grain silos). It is highly cooperative and can lead to phenomena like earthquakes, traffic jams, etc. In this Letter we point out the paramount importance of the…

无序系统与神经网络 · 物理学 2018-06-27 Varda F. Hagh , Eric I. Corwin , Kenneth Stephenson , M. F. Thorpe

A classical problem describing the collective motion of cells, is the movement driven by consumption/depletion of a nutrient. Here we analyze one of the simplest such model written as a coupled Partial Differential Equation/Ordinary…

偏微分方程分析 · 数学 2022-09-02 Pierre-Emmanuel Jabin , Benoît Perthame

We study a model of contraction-based cell motility inside a microchannel to investigate the regulation of cell polarization and motion by the mechanical resistance of the environment. A positive feedback between the asymmetry of the…

生物物理 · 物理学 2024-02-28 Tapas Singha , Pierre Sens

We investigate a three-dimensional kinetically-constrained model that exhibits two types of phase transitions at different densities. At the jamming density $ \rho_J $ there is a mixed-order phase transition in which a finite fraction of…

统计力学 · 物理学 2017-06-08 Nimrod Segall , Eial Teomy , Yair Shokef

Cell migration in morphogenesis and cancer metastasis typically involves interplay between different cell types. We construct and study a minimal, one-dimensional model comprised of two different motile cells with each cell represented as…

软凝聚态物质 · 物理学 2017-09-20 David Mayett , Nicholas Bitten , Moumita Das , J. M. Schwarz

Tumor cells invade individually or in groups, mediated by mechanical interactions between cells and their surrounding matrix. These multicellular dynamics are reminiscent of leader-follower coordination and epithelial-mesenchymal…

细胞行为 · 定量生物学 2022-06-28 Alex M. Hruska , Haiqian Yang , Susan E. Leggett , Ming Guo , Ian Y. Wong

Cell alignment often forms nematic order, which can lead to anomalous collective cell flow due to the so-called active force. Although it is appreciated that cell migration is driven by traction force, a quantitative evaluation of the…

软凝聚态物质 · 物理学 2024-02-27 Masahito Uwamichi , He Li , Zihui Zhao , Yisong Yao , Hideo Higuchi , Kyogo Kawaguchi , Masaki Sano

Cell migration is often accompanied by collisions with other cells, which can lead to cessation of movement, repolarization, and migration away from the contact site - a process termed contact inhibition of locomotion (CIL). During CIL, the…

细胞行为 · 定量生物学 2019-03-25 Aydar Uatay

Droplet formation has emerged as an essential concept for the spatiotemporal organisation of biomolecules in cells. However, classical descriptions of droplet dynamics based on passive liquid-liquid phase separation cannot capture the…

生物物理 · 物理学 2025-11-14 David Zwicker , Oliver W. Paulin , Cathelijne ter Burg

The spatiotemporal coordination and regulation of cell proliferation is fundamental in many aspects of development and tissue maintenance. Cells have the ability to adapt their division rates in response to mechanical constraints, yet we do…

定量方法 · 定量生物学 2024-04-25 Carles Falcó , Daniel J. Cohen , José A. Carrillo , Ruth E. Baker