中文
相关论文

相关论文: Molecular representation learning with language mo…

200 篇论文

The practice of fine-tuning Pre-trained Language Models (PLMs) from general or domain-specific data to a specific task with limited resources, has gained popularity within the field of natural language processing (NLP). In this work, we…

计算与语言 · 计算机科学 2023-10-31 Samuel Belkadi , Lifeng Han , Yuping Wu , Goran Nenadic

The quest for accurate prediction of drug molecule properties poses a fundamental challenge in the realm of Artificial Intelligence Drug Discovery (AIDD). An effective representation of drug molecules emerges as a pivotal component in this…

机器学习 · 计算机科学 2024-04-22 Zhuoyuan Wang , Jiacong Mi , Shan Lu , Jieyue He

Identifying the relations between chemicals and proteins is an important text mining task. BioCreative VII track 1 DrugProt task aims to promote the development and evaluation of systems that can automatically detect relations between…

计算与语言 · 计算机科学 2021-12-07 Mehmet Efruz Karabulut , K. Vijay-Shanker , Yifan Peng

Developing high-performance entity normalization algorithms that can alleviate the term variation problem is of great interest to the biomedical community. Although deep learning-based methods have been successfully applied to biomedical…

信息检索 · 计算机科学 2019-08-12 Zongcheng Ji , Qiang Wei , Hua Xu

Collecting labeled data for many important tasks in chemoinformatics is time consuming and requires expensive experiments. In recent years, machine learning has been used to learn rich representations of molecules using large scale…

机器学习 · 计算机科学 2022-05-20 A. Tevosyan , L. Khondkaryan , H. Khachatrian , G. Tadevosyan , L. Apresyan , N. Babayan , H. Stopper , Z. Navoyan

Accurate extraction of molecular representations is a critical step in the drug discovery process. In recent years, significant progress has been made in molecular representation learning methods, among which multi-modal molecular…

机器学习 · 计算机科学 2025-05-13 Rong Yin , Ruyue Liu , Xiaoshuai Hao , Xingrui Zhou , Yong Liu , Can Ma , Weiping Wang

The applications of machine learning techniques to chemistry and materials science become more numerous by the day. The main challenge is to devise representations of atomic systems that are at the same time complete and concise, so as to…

化学物理 · 物理学 2025-10-06 Michael J. Willatt , Felix Musil , Michele Ceriotti

Learning effective representations in image-based environments is crucial for sample efficient Reinforcement Learning (RL). Unfortunately, in RL, representation learning is confounded with the exploratory experience of the agent -- learning…

机器学习 · 计算机科学 2021-07-21 Denis Yarats , Rob Fergus , Alessandro Lazaric , Lerrel Pinto

In recent years, molecular representation learning has emerged as a key area of focus in various chemical tasks. However, many existing models fail to fully consider the geometric information of molecular structures, resulting in less…

机器学习 · 计算机科学 2023-06-29 Bumju Kwak , Jiwon Park , Taewon Kang , Jeonghee Jo , Byunghan Lee , Sungroh Yoon

The emerging classical-quantum transfer learning paradigm has brought a decent performance to quantum computational models in many tasks, such as computer vision, by enabling a combination of quantum models and classical pre-trained neural…

量子物理 · 物理学 2023-02-28 Qiuchi Li , Benyou Wang , Yudong Zhu , Christina Lioma , Qun Liu

Applying machine learning to tasks that operate with code changes requires their numerical representation. In this work, we propose an approach for obtaining such representations during pre-training and evaluate them on two different…

软件工程 · 计算机科学 2021-07-12 Mikhail Pravilov , Egor Bogomolov , Yaroslav Golubev , Timofey Bryksin

Transfer learning in natural language processing (NLP), as realized using models like BERT (Bi-directional Encoder Representation from Transformer), has significantly improved language representation with models that can tackle challenging…

硬件体系结构 · 计算机科学 2021-04-20 Suchita Pati , Shaizeen Aga , Nuwan Jayasena , Matthew D. Sinclair

Pre-training large-scale neural language models on raw texts has made a significant contribution to improving transfer learning in natural language processing (NLP). With the introduction of transformer-based language models, such as…

计算与语言 · 计算机科学 2024-05-08 Shoya Wada , Toshihiro Takeda , Shiro Manabe , Shozo Konishi , Jun Kamohara , Yasushi Matsumura

We present SpanBERT, a pre-training method that is designed to better represent and predict spans of text. Our approach extends BERT by (1) masking contiguous random spans, rather than random tokens, and (2) training the span boundary…

计算与语言 · 计算机科学 2020-01-22 Mandar Joshi , Danqi Chen , Yinhan Liu , Daniel S. Weld , Luke Zettlemoyer , Omer Levy

Recent advancements in language representation models such as BERT have led to a rapid improvement in numerous natural language processing tasks. However, language models usually consist of a few hundred million trainable parameters with…

机器学习 · 计算机科学 2019-12-12 Mehrdad Valipour , En-Shiun Annie Lee , Jaime R. Jamacaro , Carolina Bessega

In recent years, major advancements in natural language processing (NLP) have been driven by the emergence of large language models (LLMs), which have significantly revolutionized research and development within the field. Building upon…

计算与语言 · 计算机科学 2023-05-09 Hazal Türkmen , Oğuz Dikenelli , Cenk Eraslan , Mehmet Cem Çallı , Süha Süreyya Özbek

Machine based text comprehension has always been a significant research field in natural language processing. Once a full understanding of the text context and semantics is achieved, a deep learning model can be trained to solve a large…

计算与语言 · 计算机科学 2020-09-03 Omar Mossad , Amgad Ahmed , Anandharaju Raju , Hari Karthikeyan , Zayed Ahmed

Recent work has shown evidence that the knowledge acquired by multilingual BERT (mBERT) has two components: a language-specific and a language-neutral one. This paper analyses the relationship between them, in the context of fine-tuning on…

计算与语言 · 计算机科学 2021-12-28 Marc Tanti , Lonneke van der Plas , Claudia Borg , Albert Gatt

Pre-training has marked numerous state of the arts in high-level computer vision, while few attempts have ever been made to investigate how pre-training acts in image processing systems. In this paper, we tailor transformer-based…

计算机视觉与模式识别 · 计算机科学 2022-03-22 Wenbo Li , Xin Lu , Shengju Qian , Jiangbo Lu , Xiangyu Zhang , Jiaya Jia

The successful application of large pre-trained models such as BERT in natural language processing has attracted more attention from researchers. Since the BERT typically acts as an end-to-end black box, classification systems based on it…

计算与语言 · 计算机科学 2023-09-06 Shuai Jiang , Sayaka Kamei , Chen Li , Shengzhe Hou , Yasuhiko Morimoto