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To explore and react to their environment, living micro-swimmers have developed sophisticated strategies for locomotion - in particular, motility with multiple gaits. To understand the physical principles associated with such a behavioural…

Active propulsion, as performed by bacteria and Janus particles, in combination with hydrodynamic interaction results in the accumulation of bacteria at a flat wall. However, in microfluidic devices with cylindrical pillars of sufficiently…

生物物理 · 物理学 2024-04-15 Theresa Jakuszeit , Ottavio A. Croze

A walking droplet possesses fascinating properties due to its peculiar wave/particle interaction. The self-propelling motion of such a droplet is driven by the Faraday instability triggered around the droplet at each impact. We studied in…

流体动力学 · 物理学 2019-04-12 Nicolas Vandewalle , Boris Filoux , Maxime Hubert

Collective motion of self-propelled organisms or synthetic particles often termed active fluid has attracted enormous attention in broad scientific community because of it fundamentally non-equilibrium nature. Energy input and interactions…

软凝聚态物质 · 物理学 2014-03-05 Shuang Zhou , Andrey Sokolov , Oleg D Lavrentovich , Igor S Aranson

Motile bacteria are known to accumulate at surfaces, eventually leading to changes in bacterial motility and bio-film formation. We use a novel two-colour, three-dimensional Lagrangian tracking technique, to follow simultaneously the body…

A three-dimensional hydrodynamical model for a micro random walker is combined with the idea of chemotactic signaling network of E. coli. Diffusion exponents, orientational correlation functions and their dependence on the geometrical and…

软凝聚态物质 · 物理学 2014-10-02 H. Mohammady , B. Esckandariun , A. Najafi

Sedimentation in active fluids has come into focus due to the ubiquity of swimming micro-organisms in natural and artificial environments. Here, we experimentally investigate sedimentation of passive particles in water containing various…

流体动力学 · 物理学 2017-10-12 Jaspreet Singh , Alison E. Patteson , Prashant K. Purohit , Paulo E. Arratia

In the present work we simulate the basic two-dimensional dynamics of swarming E. coli bacteria on the surface of a moderately soft agar plate. Individual bacteria are modelled by self-propelled ridged bodies (agents), which interact with…

软凝聚态物质 · 物理学 2016-12-31 David Hansmann , Guido Fier , Rubén Carlos Buceta

Swimming organisms in their natural habitat navigate through a wide array of geometries and chemical environments. Interaction with the boundaries is ubiquitous and can significantly modify the swimming characteristics of the organism as…

流体动力学 · 物理学 2010-12-23 Saikat Jana , Soong Ho Um , Sunghwan Jung

While bacterial swimming has been well characterized in uniform liquid environments, only little is known about how bacteria propagate through complex environments, such as gel-like matrices or porous media that are typically encountered in…

软凝聚态物质 · 物理学 2024-08-06 Agniva Datta , Sönke Beier , Veronika Pfeifer , Robert Großmann , Carsten Beta

The swimming behavior of bacteria and other microorganisms is sensitive to the physical properties of the fluid in which they swim. Mucus, biofilms, and artificial liquid-crystalline solutions are all examples of fluids with some degree of…

软凝聚态物质 · 物理学 2014-12-17 Madison S. Krieger , Saverio E. Spagnolie , Thomas R. Powers

The sedimentation process in a suspension of bacteria is the result of the competition between gravity and the intrinsic motion of the microorganisms. We perform simulations of run-and-tumble "squirmers" that move in a fluid medium,…

软凝聚态物质 · 物理学 2021-11-11 Andrea Scagliarini , Ignacio Pagonabarraga

The run-and-tumble dynamics of bacteria, as exhibited by \textit{E. coli}, offers a simple experimental realization of non-Brownian, yet diffusive, particles. Here we present some analytic and numerical results for models of the ideal…

统计力学 · 物理学 2009-08-12 J. Tailleur , M. E. Cates

We study the phenomenon of the "walking droplet", by means of numerical fluid dynamics simulations using the Smoothed Particle Hydrodynamics numerical method. This phenomenon occurs when a millimetric drop is released on the surface of an…

流体动力学 · 物理学 2017-08-17 Diego Molteni , Enrico Vitanza , Onofrio Rosario Battaglia

Escherichia coli has long been used as a model organism due to the extensive experimental characterization of its pathways and molecular components. Take chemotaxis as an example, which allows bacteria to sense and swim in response to…

细胞行为 · 定量生物学 2015-12-09 Gabriele Micali , Robert G. Endres

We study catalytic Janus swimmers and Escherichia coli bacteria swimming in a two-dimensional colloidal crystal. The Janus swimmers orbit individual colloids and hop between colloids stochastically, with a hopping rate that varies inversely…

One striking feature of bacterial motion is their ability to swim upstream along corners and crevices, by leveraging hydrodynamic interactions. This motion through anatomic ducts or medical devices might be at the origin of serious…

软凝聚态物质 · 物理学 2020-04-07 Nuris Figueroa-Morales , Aramis Rivera , Rodrigo Soto , Anke Lindner , Ernesto Altshuler , Eric Clement

Traditionally, the primary mode for locomotion of amoeboid cells was thought to be crawling on a substrate. Recently, it has been experimentally shown that \textit{Dictostelium} amoeba and neutrophils can also swim in a directed fashion.…

生物物理 · 物理学 2015-05-19 Albert Bae , Eberhard Bodenschatz

The self-propelled motion of microscopic bodies immersed in a fluid medium is studied using molecular dynamics simulation. The advantage of the atomistic approach is that the detailed level of description allows complete freedom in…

软凝聚态物质 · 物理学 2007-12-06 D. C. Rapaport

Fully atomistic molecular dynamics simulations were carried out to investigate how a liquid-like water droplet behaves when into contact with a nanopore formed by carbon nanotube arrays. We have considered different tube arrays, varying the…

介观与纳米尺度物理 · 物理学 2017-02-22 Ygor M. Jaques , Douglas S. Galvao