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Biological networks provide insight into the complex organization of biological processes in a cell at the system level. They are an effective tool for understanding the comprehensive map of functional interactions, finding the functional…

分子网络 · 定量生物学 2017-09-14 Somaye Hashemifar

A network supporting deep unsupervised learning is presented. The network is an autoencoder with lateral shortcut connections from the encoder to decoder at each level of the hierarchy. The lateral shortcut connections allow the higher…

机器学习 · 统计学 2015-02-03 Harri Valpola

A large amount of recent research has the far-reaching goal of finding training methods for deep neural networks that can serve as alternatives to backpropagation (BP). A prominent example is predictive coding (PC), which is a…

机器学习 · 计算机科学 2022-11-08 Luca Pinchetti , Tommaso Salvatori , Yordan Yordanov , Beren Millidge , Yuhang Song , Thomas Lukasiewicz

Neuroscience has long informed the development of artificial neural networks, but the success of modern architectures invites, in turn, the converse: can modern networks teach us lessons about brain function? Here, we examine the structure…

神经元与认知 · 定量生物学 2026-03-17 Peter Koenig , Mario Negrello

Visual-frame prediction is a pixel-dense prediction task that infers future frames from past frames. Lacking of appearance details, low prediction accuracy and high computational overhead are still major problems with current models or…

计算机视觉与模式识别 · 计算机科学 2022-11-16 Chaofan Ling , Junpei Zhong , Weihua Li

This study presents a dynamic neural network model based on the predictive coding framework for perceiving and predicting the dynamic visuo-proprioceptive patterns. In our previous study [1], we have shown that the deep dynamic neural…

人工智能 · 计算机科学 2017-06-09 Jungsik Hwang , Jinhyung Kim , Ahmadreza Ahmadi , Minkyu Choi , Jun Tani

Predictive coding (PC) is a brain-inspired local learning algorithm that has recently been suggested to provide advantages over backpropagation (BP) in biologically relevant scenarios. While theoretical work has mainly focused on showing…

神经与进化计算 · 计算机科学 2023-06-01 Francesco Innocenti , Ryan Singh , Christopher L. Buckley

Predictive coding graphs (PCGs) are a recently introduced generalization to predictive coding networks, a neuroscience-inspired probabilistic latent variable model. Here, we prove how PCGs define a mathematical superset of feedforward…

机器学习 · 计算机科学 2026-03-09 Björn van Zwol

We examine two fundamental tasks associated with graph representation learning: link prediction and semi-supervised node classification. We present a novel autoencoder architecture capable of learning a joint representation of both local…

机器学习 · 计算机科学 2019-03-12 Phi Vu Tran

To have a superior generalization, a deep learning neural network often involves a large size of training sample. With increase of hidden layers in order to increase learning ability, neural network has potential degradation in accuracy.…

机器学习 · 计算机科学 2019-01-01 Lianfa Li , Ying Fang , Jun Wu , Jinfeng Wang

Artificial intelligence (AI) is rapidly becoming one of the key technologies of this century. The majority of results in AI thus far have been achieved using deep neural networks trained with a learning algorithm called error…

Proteins are responsible for the most diverse set of functions in biology. The ability to extract information from protein sequences and to predict the effects of mutations is extremely valuable in many domains of biology and medicine.…

定量方法 · 定量生物学 2018-01-04 Sam Sinai , Eric Kelsic , George M. Church , Martin A. Nowak

Top-down feedback in cortex is critical for guiding sensory processing, which has prominently been formalized in the theory of hierarchical predictive coding (hPC). However, experimental evidence for error units, which are central to the…

神经元与认知 · 定量生物学 2022-11-23 Fabian A. Mikulasch , Lucas Rudelt , Michael Wibral , Viola Priesemann

Predictive coding (PC) is an influential computational model of visual learning and inference in the brain. Classical PC was proposed as a top-down generative model, where the brain actively predicts upcoming visual inputs, and inference…

机器学习 · 计算机科学 2025-12-18 Gaspard Oliviers , Mufeng Tang , Rafal Bogacz

Convolutional neural network (CNN) driven by image recognition has been shown to be able to explain cortical responses to static pictures at ventral-stream areas. Here, we further showed that such CNN could reliably predict and decode…

神经元与认知 · 定量生物学 2017-11-15 Haiguang Wen , Junxing Shi , Yizhen Zhang , Kun-Han Lu , Jiayue Cao , Zhongming Liu

Empirical evidence shows that deep vision networks often represent concepts as directions in latent space with concept information written along directional components in the vector representation of the input. However, the mechanism to…

计算机视觉与模式识别 · 计算机科学 2026-03-11 Alexandros Doumanoglou , Kurt Driessens , Dimitrios Zarpalas

Artificial neural networks have become important to improve the search for admissible string compactifications and characterize them. In this paper we construct the heterotic orbiencoder, a general deep autoencoder to study heterotic…

高能物理 - 理论 · 物理学 2024-01-31 Enrique Escalante-Notario , Ignacio Portillo-Castillo , Saul Ramos-Sanchez

Advances in variational inference enable parameterisation of probabilistic models by deep neural networks. This combines the statistical transparency of the probabilistic modelling framework with the representational power of deep learning.…

计算与语言 · 计算机科学 2020-05-05 Tom Pelsmaeker , Wilker Aziz

Autoencoders are unsupervised machine learning circuits whose learning goal is to minimize a distortion measure between inputs and outputs. Linear autoencoders can be defined over any field and only real-valued linear autoencoder have been…

神经与进化计算 · 计算机科学 2014-03-19 Pierre Baldi , Zhiqin Lu

The cerebrovascular tree is a complex anatomical structure that plays a crucial role in the brain irrigation. A precise identification of the bifurcations in the vascular network is essential for understanding various cerebral pathologies.…

图像与视频处理 · 电气工程与系统科学 2023-08-25 Ibtissam Essadik , Anass Nouri , Raja Touahni , Florent Autrusseau