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In structural brain networks the connections of interest consist of white-matter fibre bundles between spatially segregated brain regions. The presence, location and orientation of these white matter tracts can be derived using diffusion…

神经元与认知 · 定量生物学 2012-02-09 M. Hinne , T. Heskes , M. A. J. van Gerven

The increasing penetration of intermittent distributed energy resources in power networks calls for novel planning and control methodologies which hinge on detailed knowledge of the grid. However, reliable information concerning the system…

系统与控制 · 电气工程与系统科学 2021-09-21 Emanuele Fabbiani , Pulkit Nahata , Giuseppe De Nicolao , Giancarlo Ferrari-Trecate

Background:Typically, proteins perform key biological functions by interacting with each other. As a consequence, predicting which protein pairs interact is a fundamental problem. Experimental methods are slow, expensive, and may be error…

生物大分子 · 定量生物学 2022-02-08 Leonardo Martini , Adriano Fazzone , Luca Becchetti

Computational techniques are required for narrowing down the vast space of possibilities to plausible prebiotic scenarios, since precise information on the molecular composition, the dominant reaction chemistry, and the conditions for that…

分子网络 · 定量生物学 2018-02-07 Jakob L. Andersen , Christoph Flamm , Daniel Merkle , Peter F. Stadler

This paper analyzes the circumstances under which Bayesian networks can be pruned in order to reduce computational complexity without altering the computation for variables of interest. Given a problem instance which consists of a query and…

人工智能 · 计算机科学 2013-04-05 Michelle Baker , Terrance E. Boult

In living cells, chemical reactions are connected by sharing their products and substrates, and form complex networks, e.g. metabolic pathways. Here we developed a theory to predict the sensitivity, i.e. the responses of concentrations and…

分子网络 · 定量生物学 2016-08-24 Takashi Okada , Atsushi Mochizuki

Bayesian learning is a powerful learning framework which combines the external information of the data (background information) with the internal information (training data) in a logically consistent way in inference and prediction. By…

机器学习 · 统计学 2026-02-11 Erdong Guo , David Draper

Nucleosynthesis is a complex process in astro-nuclear evolution. In this work, we construct a directed multi-layer nuclear reaction network using the substrate-product method from a thermonuclear reaction database, JINA REACLIB. The network…

核理论 · 物理学 2020-06-02 H. L. Liu , D. D. Han , Y. G. Ma , L. Zhu

The Bayesian machine learning is a promising tool for the evaluation of nuclear fission data but its potential capability has not been fully realized. We attempt to optimize the performances of the multilayer Bayesian neural networks for…

核理论 · 物理学 2021-12-22 Zi-Ao Wang , Junchen Pei

Analyzing the behavior of complex interdependent networks requires complete information about the network topology and the interdependent links across networks. For many applications such as critical infrastructure systems, understanding…

机器学习 · 计算机科学 2022-11-29 Yu Wang , Jin-Zhu Yu , Hiba Baroud

Unraveling the structure of complex biological networks and relating it to their functional role is an important task in systems biology. Here we attempt to characterize the functional organization of the large-scale metabolic networks of…

分子网络 · 定量生物学 2015-06-12 Shalini Singh , Areejit Samal , Varun Giri , Sandeep Krishna , Nandula Raghuram , Sanjay Jain

We present the state-of-the-art single-zone nuclear reaction network WinNet that is capable of calculating the nucleosynthetic yields of a large variety of astrophysical environments and conditions. This ranges from the calculation of the…

Modeling the associations between real world entities from their multivariate cross-sectional profiles can provide cues into the concerted working of these entities as a system. Several techniques have been proposed for deciphering these…

机器学习 · 计算机科学 2025-01-07 Radha Nagarajan , Marco Scutari

We present a new method to approximate posterior probabilities of Bayesian Network using Deep Neural Network. Experiment results on several public Bayesian Network datasets shows that Deep Neural Network is capable of learning joint…

机器学习 · 计算机科学 2018-01-12 Jie Jia , Honggang Zhou , Yunchun Li

Performing exact inference on Bayesian networks is known to be #P-hard. Typically approximate inference techniques are used instead to sample from the distribution on query variables given the values $e$ of evidence variables. Classically,…

量子物理 · 物理学 2014-10-02 Guang Hao Low , Theodore J. Yoder , Isaac L. Chuang

Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

信号处理 · 电气工程与系统科学 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami

Decomposition of biomolecular reaction networks into pathways is a powerful approach to the analysis of metabolic and signalling networks. Current approaches based on analysis of the stoichiometric matrix reveal information about…

分子网络 · 定量生物学 2018-08-14 Peter J. Gawthrop , Edmund J. Crampin

Networks are widely used in the biological, physical, and social sciences as a concise mathematical representation of the topology of systems of interacting components. Understanding the structure of these networks is one of the outstanding…

数据分析、统计与概率 · 物理学 2007-06-21 M. E. J. Newman , E. A. Leicht

Graph neural networks have demonstrated excellent applicability to a wide range of domains, including social networks, biological systems, recommendation systems, and wireless communications. Yet a principled theoretical understanding of…

机器学习 · 计算机科学 2026-04-14 Xinping Yi

Bayesian networks (BNs) are a widely used class of probabilistic graphical models employed in numerous application domains. However, inferring the network's graphical structure from data remains challenging. Bayesian structure learners…

机器学习 · 计算机科学 2025-11-19 William Zhao , Guy Van den Broeck , Benjie Wang