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The study of cells and their responses to genetic or chemical perturbations promises to accelerate the discovery of therapeutic targets. However, designing adequate and insightful models for such data is difficult because the response of a…

机器学习 · 计算机科学 2024-12-04 Haiyi Mao , Romain Lopez , Kai Liu , Jan-Christian Hütter , David Richmond , Panayiotis V. Benos , Lin Qiu

Regularized linear discriminant analysis (RLDA) is a widely used tool for classification and dimensionality reduction, but its performance in high-dimensional scenarios is inconsistent. Existing theoretical analyses of RLDA often lack clear…

机器学习 · 统计学 2025-07-23 Yonghan Zhang , Zhangni Pu , Lu Yan , Jiang Hu

Computer vision-based methods have valuable use cases in precision medicine, and recognizing facial phenotypes of genetic disorders is one of them. Many genetic disorders are known to affect faces' visual appearance and geometry. Automated…

计算机视觉与模式识别 · 计算机科学 2023-05-25 Ömer Sümer , Fabio Hellmann , Alexander Hustinx , Tzung-Chien Hsieh , Elisabeth André , Peter Krawitz

Federated learning (FL) has shown success in collaboratively training a model among decentralized data resources without directly sharing privacy-sensitive training data. Despite recent advances, non-IID (non-independent and identically…

计算机视觉与模式识别 · 计算机科学 2025-11-18 Cheng-Chang Tsai , Kai-Wen Cheng , Chun-Shien Lu

Federated learning (FL) is a distributed learning framework that leverages commonalities between distributed client datasets to train a global model. Under heterogeneous clients, however, FL can fail to produce stable training results.…

机器学习 · 计算机科学 2024-11-04 Connor J. Mclaughlin , Lili Su

Although Deep Convolutional Neural Networks (CNNs) have liberated their power in various computer vision tasks, the most important components of CNN, convolutional layers and fully connected layers, are still limited to linear…

计算机视觉与模式识别 · 计算机科学 2017-09-05 Yanghao Li , Naiyan Wang , Jiaying Liu , Xiaodi Hou

Federated learning (FL) for histopathology image segmentation involving multiple medical sites plays a crucial role in advancing the field of accurate disease diagnosis and treatment. However, it is still a task of great challenges due to…

图像与视频处理 · 电气工程与系统科学 2023-12-21 Yuan Zhang , Yaolei Qi , Xiaoming Qi , Lotfi Senhadji , Yongyue Wei , Feng Chen , Guanyu Yang

Reliable large-scale cell detection and segmentation is the fundamental first step to understanding biological processes in the brain. The ability to phenotype cells at scale can accelerate preclinical drug evaluation and system-level brain…

计算机视觉与模式识别 · 计算机科学 2023-01-03 Son T. Ly , Bai Lin , Hung Q. Vo , Dragan Maric , Badri Roysam , Hien V. Nguyen

Applications such as face recognition that deal with high-dimensional data need a mapping technique that introduces representation of low-dimensional features with enhanced discriminatory power and a proper classifier, able to classify…

计算机视觉与模式识别 · 计算机科学 2008-12-16 Seyyed Majid Valiollahzadeh , Abolghasem Sayadiyan , Mohammad Nazari

With the development of high-throughput technologies, genomics datasets rapidly grow in size, including functional genomics data. This has allowed the training of large Deep Learning (DL) models to predict epigenetic readouts, such as…

基因组学 · 定量生物学 2024-05-30 Alexander Rakowski , Remo Monti , Viktoriia Huryn , Marta Lemanczyk , Uwe Ohler , Christoph Lippert

Feature selection is a dimensionality reduction technique that selects a subset of representative features from high dimensional data by eliminating irrelevant and redundant features. Recently, feature selection combined with sparse…

计算机视觉与模式识别 · 计算机科学 2018-04-24 Siwei Feng , Marco F. Duarte

We propose rectified factor networks (RFNs) to efficiently construct very sparse, non-linear, high-dimensional representations of the input. RFN models identify rare and small events in the input, have a low interference between code units,…

机器学习 · 计算机科学 2018-01-31 Djork-Arné Clevert , Andreas Mayr , Thomas Unterthiner , Sepp Hochreiter

Large language models (LLMs) have emerged as important components across various fields, yet their training requires substantial computation resources and abundant labeled data. It poses a challenge to robustly training LLMs for individual…

分布式、并行与集群计算 · 计算机科学 2024-06-13 Jiaxing QI , Zhongzhi Luan , Shaohan Huang , Carol Fung , Hailong Yang , Depei Qian

Feature selection is frequently used as a pre-processing step to machine learning. It is a process of choosing a subset of original features so that the feature space is optimally reduced according to a certain evaluation criterion. The…

计算机视觉与模式识别 · 计算机科学 2014-01-07 Vijendra Singh , Shivani Pathak

In the field of image-based drug discovery, capturing the phenotypic response of cells to various drug treatments and perturbations is a crucial step. However, existing methods require computationally extensive and complex multi-step…

The detection of rare cell types in single-cell transcriptomics data is crucial for elucidating disease pathogenesis and tissue development dynamics. However, a critical gap that persists in current methods is their inability to provide an…

基因组学 · 定量生物学 2026-01-06 Di Su , Kai Ming Ting , Jie Zhang , Xiaorui Zhang , Xinpeng Li

This paper uses Factored Latent Analysis (FLA) to learn a factorized, segmental representation for observations of tracked objects over time. Factored Latent Analysis is latent class analysis in which the observation space is subdivided and…

机器学习 · 计算机科学 2012-07-19 Chris Stauffer

Dimensionality reduction techniques play an essential role in data analytics, signal processing and machine learning. Dimensionality reduction is usually performed in a preprocessing stage that is separate from subsequent data analysis,…

机器学习 · 计算机科学 2016-12-21 Bo Yang , Xiao Fu , Nicholas D. Sidiropoulos

Linear Discriminant Analysis (LDA) is a fundamental method for classification. Its simple linear structure facilitates interpretation, and it is naturally suited to multi-class settings. LDA is also closely connected to several classical…

统计方法学 · 统计学 2026-04-09 Xin Bing , Bingqing Li , Marten Wegkamp

The focus of this paper is to extend Fisher's linear discriminant analysis (LDA) to both densely re-corded functional data and sparsely observed longitudinal data for general $c$-category classification problems. We propose an efficient…

统计方法学 · 统计学 2017-09-07 Lu-Hung Chen , Ci-Ren Jiang