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Most dense retrieval models contain an implicit assumption: the training query-document pairs are exactly matched. Since it is expensive to annotate the corpus manually, training pairs in real-world applications are usually collected…

计算与语言 · 计算机科学 2023-11-08 Hang Zhang , Yeyun Gong , Xingwei He , Dayiheng Liu , Daya Guo , Jiancheng Lv , Jian Guo

Quantum error correcting (QEC) stabilizer codes enable protection of quantum information against errors during storage and processing. Simulation of noisy QEC codes is used to identify the noise parameters necessary for advantageous…

量子物理 · 物理学 2025-03-17 Sascha Heußen , Don Winter , Manuel Rispler , Markus Müller

We present a finite blocklength performance bound for a DNA storage channel with insertions, deletions, and substitutions. The considered bound -- the dependency testing (DT) bound, introduced by Polyanskiy et al. in 2010 -- provides an…

信息论 · 计算机科学 2023-08-07 Issam Maarouf , Gianluigi Liva , Eirik Rosnes , Alexandre Graell i Amat

Over the past years, the ever-growing trend on data storage demand, more specifically for "cold" data (rarely accessed data), has motivated research for alternative systems of data storage. Because of its biochemical characteristics,…

图像与视频处理 · 电气工程与系统科学 2023-06-23 Xavier Pic , Eva Gil San Antonio , Melpomeni Dimopoulou , Marc Antonini

DNA exhibits remarkable potential as a data storage solution due to its impressive storage density and long-term stability, stemming from its inherent biomolecular structure. However, developing this novel medium comes with its own set of…

图像与视频处理 · 电气工程与系统科学 2023-09-14 Trung Hieu Le , Xavier Pic , Jeremy Mateos , Marc Antonini

Learning from noisy labels is a challenge that arises in many real-world applications where training data can contain incorrect or corrupted labels. When fine-tuning language models with noisy labels, models can easily overfit the label…

计算与语言 · 计算机科学 2023-06-14 Yuchen Zhuang , Yue Yu , Lingkai Kong , Xiang Chen , Chao Zhang

With the rapid increase of available digital data, DNA storage is identified as a storage media with high density and capability of long-term preservation, especially for archival storage systems. However, the encoding density (i.e., how…

新兴技术 · 计算机科学 2021-08-26 Bingzhe Li , Li Ou , David Du

Deep neural networks (DNNs) are capable of perfectly fitting the training data, including memorizing noisy data. It is commonly believed that memorization hurts generalization. Therefore, many recent works propose mitigation strategies to…

机器学习 · 统计学 2022-10-28 Carey E. Priebe , Ningyuan Huang , Soledad Villar , Cong Mu , Li Chen

Concatenating quantum error correction codes scales error correction capability by driving logical error rates down double-exponentially across levels. However, the noise structure shifts under concatenation, making it hard to choose an…

量子物理 · 物理学 2026-04-17 Nico Meyer , Christopher Mutschler , Dominik Seuß , Andreas Maier , Daniel D. Scherer

Large training datasets almost always contain examples with inaccurate or incorrect labels. Deep Neural Networks (DNNs) tend to overfit training label noise, resulting in poorer model performance in practice. To address this problem, we…

计算机视觉与模式识别 · 计算机科学 2022-03-01 Chen Gong , Kong Bin , Eric J. Seibel , Xin Wang , Youbing Yin , Qi Song

This work studies problems in data reconstruction, an important area with numerous applications. In particular, we examine the reconstruction of binary and non-binary sequences from synchronization (insertion/deletion-correcting) codes.…

信息论 · 计算机科学 2017-03-09 Frederic Sala , Ryan Gabrys , Clayton Schoeny , Lara Dolecek

This paper studies \emph{linear} and \emph{affine} error-correcting codes for correcting synchronization errors such as insertions and deletions. We call such codes linear/affine insdel codes. Linear codes that can correct even a single…

信息论 · 计算机科学 2022-07-22 Kuan Cheng , Venkatesan Guruswami , Bernhard Haeupler , Xin Li

We describe properties and constructions of constraint-based codes for DNA-based data storage which account for the maximum repetition length and AT/GC balance. We present algorithms for computing the number of sequences with maximum…

信息论 · 计算机科学 2018-12-18 Kees A. Schouhamer Immink , Kui Cai

In this paper, we study how often unique decoding from $t$ insertions or $t$ deletions occurs for error correcting codes. Insertions and deletions frequently occur in synchronization problems and DNA, a medium which is beginning to be used…

信息论 · 计算机科学 2017-09-29 Kayvon Mazooji

DNA has many valuable characteristics that make it suitable for a long-term storage medium, in particular its durability and high information density. DNA can be stored safely for hundreds of years with virtually no degradation, in contrast…

定量方法 · 定量生物学 2022-05-31 Jamie J. Alnasir , Thomas Heinis , Louis Carteron

Differentially private stochastic gradient descent (DP-SGD) is the gold standard for training machine learning models with formal differential privacy guarantees. Several recent extensions improve its accuracy by introducing correlated…

机器学习 · 计算机科学 2026-05-13 Nikita P. Kalinin , Ryan McKenna , Rasmus Pagh , Christoph H. Lampert

As its availability and generality in online services, implicit feedback is more commonly used in recommender systems. However, implicit feedback usually presents noisy samples in real-world recommendation scenarios (such as misclicks or…

信息检索 · 计算机科学 2024-05-29 Zhuangzhuang He , Yifan Wang , Yonghui Yang , Peijie Sun , Le Wu , Haoyue Bai , Jinqi Gong , Richang Hong , Min Zhang

In this work, we investigate a challenging problem, which has been considered to be an important criterion in designing codewords for DNA computing purposes, namely secondary structure avoidance in single-stranded DNA molecules. In short,…

信息论 · 计算机科学 2023-02-28 Tuan Thanh Nguyen , Kui Cai , Han Mao Kiah , Duc Tu Dao , Kees A. Schouhamer Immink

This paper introduces a new family of reconstruction codes which is motivated by applications in DNA data storage and sequencing. In such applications, DNA strands are sequenced by reading some subset of their substrings. While previous…

信息论 · 计算机科学 2023-04-21 Yonatan Yehezkeally , Daniella Bar-Lev , Sagi Marcovich , Eitan Yaakobi

We present a new deep-neural-network (DNN) based error correction code for fading channels with output feedback, called deep SNR-robust feedback (DRF) code. At the encoder, parity symbols are generated by a long short term memory (LSTM)…

信息论 · 计算机科学 2021-12-23 Mahdi Boloursaz Mashhadi , Deniz Gunduz , Alberto Perotti , Branislav Popovic