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Biomarker discovery is vital in advancing personalized medicine, offering insights into disease diagnosis, prognosis, and therapeutic efficacy. Traditionally, the identification and validation of biomarkers heavily depend on extensive…

机器学习 · 计算机科学 2024-09-25 Wangyang Ying , Dongjie Wang , Xuanming Hu , Ji Qiu , Jin Park , Yanjie Fu

Automatically generating macro research reports from economic news is an important yet challenging task. As we all know, it requires the macro analysts to write such reports within a short period of time after the important economic news…

计算与语言 · 计算机科学 2019-11-22 Wenxin Hu , Xiaofeng Zhang , Gang Yang

Motivation: Gene selection has become a common task in most gene expression studies. The objective of such research is often to identify the smallest possible set of genes that can still achieve good predictive performance. The problem of…

统计方法学 · 统计学 2015-11-25 Stéphane Guerrier , Nabil Mili , Roberto Molinari , Samuel Orso , Marco Avella-Medina , Yanyuan Ma

Genome data are crucial in modern medicine, offering significant potential for diagnosis and treatment. Thanks to technological advancements, many millions of healthy and diseased genomes have already been sequenced; however, obtaining the…

基因组学 · 定量生物学 2024-06-18 Teddy Lazebnik , Liron Simon-Keren

Foundation models (FMs) are transforming computational pathology by offering new ways to analyze histopathology images. However, FMs typically require weeks of training on large databases, making their creation a resource-intensive process.…

图像与视频处理 · 电气工程与系统科学 2026-01-27 Till Nicke , Daniela Schacherer , Jan Raphael Schäfer , Natalia Artysh , Antje Prasse , André Homeyer , Andrea Schenk , Henning Höfener , Johannes Lotz

Retrieving gene functional networks from knowledge databases presents a challenge due to the mismatch between disease networks and subtype-specific variations. Current solutions, including statistical and deep learning methods, often fail…

机器学习 · 计算机科学 2025-02-25 Ziwei Yang , Zheng Chen , Xin Liu , Rikuto Kotoge , Peng Chen , Yasuko Matsubara , Yasushi Sakurai , Jimeng Sun

The goal of case-based retrieval is to assist physicians in the clinical decision making process, by finding relevant medical literature in large archives. We propose a research that aims at improving the effectiveness of case-based…

信息检索 · 计算机科学 2018-11-28 Stefano Marchesin

Cancer is responsible for millions of deaths worldwide every year. Although significant progress has been achieved in cancer medicine, many issues remain to be addressed for improving cancer therapy. Appropriate cancer patient…

机器学习 · 计算机科学 2021-03-31 David Oniani , Chen Wang , Yiqing Zhao , Andrew Wen , Hongfang Liu , Feichen Shen

Documentation of airport operations is inherently complex due to extensive technical terminology, rigorous regulations, proprietary regional information, and fragmented communication across multiple stakeholders. The resulting data silos…

人工智能 · 计算机科学 2026-03-30 Darryl Teo , Adharsha Sam , Chuan Shen Marcus Koh , Rakesh Nagi , Nuno Antunes Ribeiro

We propose a new multi-network-based strategy to integrate different layers of genomic information and use them in a coordinate way to identify driving cancer genes. The multi-networks that we consider combine transcription factor…

分子网络 · 定量生物学 2015-12-10 Laura Cantini , Enzo Medico , Santo Fortunato , Michele Caselle

A systematic review identifies and collates various clinical studies and compares data elements and results in order to provide an evidence based answer for a particular clinical question. The process is manual and involves lot of time. A…

Many financial jobs rely on news to learn about causal events in the past and present, to make informed decisions and predictions about the future. With the ever-increasing amount of news available online, there is a need to automate the…

计算与语言 · 计算机科学 2023-08-01 Fiona Anting Tan , Debdeep Paul , Sahim Yamaura , Miura Koji , See-Kiong Ng

Knowledge-based machine translation (KBMT) systems have achieved excellent results in constrained domains, but have not yet scaled up to newspaper text. The reason is that knowledge resources (lexicons, grammar rules, world models) must be…

cmp-lg · 计算机科学 2008-02-03 Kevin Knight , Steve K. Luk

This paper explores the development and application of an automated system designed to extract information from semi-structured interview transcripts. Given the labor-intensive nature of traditional qualitative analysis methods, such as…

计算与语言 · 计算机科学 2024-03-11 Angelina Parfenova

Background : Knowledge is evolving over time, often as a result of new discoveries or changes in the adopted methods of reasoning. Also, new facts or evidence may become available, leading to new understandings of complex phenomena. This is…

计算与语言 · 计算机科学 2023-04-24 Ayoub Harnoune , Maryem Rhanoui , Mounia Mikram , Siham Yousfi , Zineb Elkaimbillah , Bouchra El Asri

Drug discovery and development is a complex and costly process. Machine learning approaches are being investigated to help improve the effectiveness and speed of multiple stages of the drug discovery pipeline. Of these, those that use…

In this paper, we present a customizable datacentric system that automatically generates common misspellings for complex health-related terms. The spelling variant generator relies on a dense vector model learned from large unlabeled text,…

计算与语言 · 计算机科学 2023-06-21 Abeed Sarker , Graciela Gonzalez-Hernandez

With the rapid development of precision medicine, a large amount of health data (such as electronic health records, gene sequencing, medical images, etc.) has been produced. It encourages more and more interest in data-driven insight…

计算与语言 · 计算机科学 2019-12-10 Sendong Zhao , Fei Wang

In this paper we propose a novel approach based on knowledge graphs to provide timely access to structured information, to enable actionable technology intelligence, and improve cyber-physical systems planning. Our framework encompasses a…

人工智能 · 计算机科学 2024-10-01 Frank Wawrzik , Matthias Plaue , Savan Vekariya , Christoph Grimm

When deciding to read an article or incorporate it into their research, scholars often seek to quickly identify and understand its main ideas. In this paper, we aim to extract these key concepts and contributions from scientific articles in…

计算与语言 · 计算机科学 2025-07-21 Hosein Azarbonyad , Zi Long Zhu , Georgios Cheirmpos , Zubair Afzal , Vikrant Yadav , Georgios Tsatsaronis