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The cytoskeleton is regulated by a plethora of enzymes that influence the stability and dynamics of cytoskeletal filaments. Molecular motors of the kinesin-8 protein family depolymerise microtubules in a length-dependent manner, and…

亚细胞过程 · 定量生物学 2014-10-29 Louis Reese , Anna Melbinger , Erwin Frey

Structural Maintenance Complexes (SMC) are energy consuming motors that are important in folding the genome by loop extrusion (LE) in all stages of the cell cycle. Single molecule magnetic tweezer pulling experiments have revealed that…

软凝聚态物质 · 物理学 2026-05-07 Atreya Dey , Guang Shi , Ryota Takaki , D. Thirumalai

The transfer of mechanical signals through cells is a complex phenomenon. To uncover a new mechanotransduction pathway, we study the frequency-dependent transport of mechanical stimuli by single microtubules and small networks in a…

生物物理 · 物理学 2017-05-03 M. D. Koch , N. Schneider , P. Nick , A. Rohrbach

Many biological processes are supported by special molecules, called motor proteins or molecular motors, that transport cellular cargoes along linear protein filaments and can reversibly associate to their tracks. Stimulated by these…

统计力学 · 物理学 2021-11-17 Akriti Jindal , Anatoly B. Kolomeisky , Arvind Kumar Gupta

In nature, many unicellular organisms are able to swim with the help of beating filaments, where local energy input leads to cooperative undulatory beating motion. Here, we investigate by employing reinforcement learning how undulatory…

生物物理 · 物理学 2025-11-04 Fumiya Tokoro , Hideki Takayama , Shinji Deguchi , Andreas Zöttl , Daiki Matsunaga

Active processes drive and guide biological dynamics across scales -- from subcellular cytoskeletal remodelling, through tissue development in embryogenesis, to population-level bacterial colonies expansion. In each of these, biological…

Thin film dynamics and associated instability mechanisms have triggered a wide range of scientific innovations, as attributed to their abilities of creating fascinating patterns over small scales. Here, we demonstrate a new thin film…

流体动力学 · 物理学 2014-12-04 Debapriya Chakraborty , Suman Chakraborty

The presence of membrane tubules in living cells is essential to many biological processes. In cells, one mechanism to form nanosized lipid tubules is via molecular motor induced bilayer extraction. In this paper, we describe a simple…

生物大分子 · 定量生物学 2016-10-04 Chai Lor , Joseph D. Lopes , Michelle K. Mattson-Hoss , Jing Xu , Linda S. Hirst

Hollow microgels are elastic polymer shells easily realizable in experiments. Recent works have shown the emergence of buckling events in dilute hollow microgels under the effect of an added osmotic pressure. Here, we perform large-scale…

软凝聚态物质 · 物理学 2026-01-19 Leah Rank , Emanuela Zaccarelli

Cells and tissues exert forces and can actively change shape. This strikingly autonomous behavior is powered by the cytoskeleton, which includes an active gel of actin filaments, crosslinks, and myosin molecular motors. Although individual…

软凝聚态物质 · 物理学 2017-07-26 José Alvarado , Misha Sheinman , Abhinav Sharma , Fred C. MacKintosh , Gijsje H. Koenderink

Propagating spiral waves have been discovered in various chemical, biological and physical systems. Spiral waves in multicellular organisms are often associated with essential living functions. Although certain eukaryotic microorganisms…

生物物理 · 物理学 2024-06-04 Shiqi Liu , Ye Li , Yuhao Wang , Yilin Wu

Living systems often exhibit internal driving: active, molecular processes drive nonequilibrium phenomena such as metabolism or migration. Active gels constitute a fascinating class of internally driven matter, where molecular motors exert…

The transport of macromolecules, such as DNA, through the cytoskeleton is critical to wide-ranging cellular processes from cytoplasmic streaming to transcription. The rigidity and steric hindrances imparted by the network of filaments…

Intracellular transport is essential for maintaining proper cellular function in most eukaryotic cells, with perturbations in active transport resulting in several types of disease. Efficient delivery of critical cargos to specific…

生物物理 · 物理学 2016-08-16 David Ando , Nickolay Korabel , Kerwyn Casey Huang , Ajay Gopinathan

Biopolymers serve as one-dimensional tracks on which motor proteins move to perform their biological roles. Motor protein phenomena have inspired theoretical models of one-dimensional transport, crowding, and jamming. Experiments studying…

生物物理 · 物理学 2016-05-25 Hui-Shun Kuan , M. D. Betterton

The twisting and writhing of a cell body and associated mechanical stresses is an underappreciated constraint on microbial self-propulsion. Multi-flagellated bacteria can even buckle and writhe under their own activity as they swim through…

软凝聚态物质 · 物理学 2023-09-25 Wilson Lough , Douglas B. Weibel , Saverio E. Spagnolie

Collective motion is ubiquitous in active systems at all length and time scales. The mechanisms behind such collective motion usually are alignment interactions between active particles, effective alignment after collisions between agents…

软凝聚态物质 · 物理学 2026-02-24 José Martín-Roca , Daniel Escobar Ortiz , Chantal Valeriani , Horacio Serna

From intracellular protein trafficking to large scale motion of animal groups, the physical concepts driving the self-organization of living systems are still largely unraveled. Selforganization of active entities, leading to novel phases…

软凝聚态物质 · 物理学 2019-11-12 Benoit Vincenti , Gabriel Ramos , Maria Luisa Cordero , Carine Douarche , Rodrigo Soto , Eric Clément

Building mathematical models of brains is difficult because of the sheer complexity of the problem. One potential starting point is through basal cognition, which gives abstract representation of a range of organisms without central nervous…

神经元与认知 · 定量生物学 2024-11-08 Linnéa Gyllingberg , Yu Tian , David J. T. Sumpter

The bacterial flagellar motor drives the rotation of flagellar filaments and enables many species of bacteria to swim. Torque is generated by interaction of stator units, anchored to the peptidoglycan cell wall, with the rotor. Recent…

亚细胞过程 · 定量生物学 2010-08-18 G. Meacci , Y. Tu
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