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The segmentation, seen as the association of a partition with an image, is a difficult task. It can be decomposed in two steps: at first, a family of contours associated with a series of nested partitions (or hierarchy) is created and…

计算机视觉与模式识别 · 计算机科学 2016-09-12 Amin Fehri , Santiago Velasco-Forero , Fernand Meyer

Deep learning has revolutionized medical and biological imaging, particularly in segmentation tasks. However, segmenting biological cells remains challenging due to the high variability and complexity of cell shapes. Addressing this…

计算机视觉与模式识别 · 计算机科学 2025-06-03 Tianhao Zhang , Heather J. McCourty , Berardo M. Sanchez-Tafolla , Anton Nikolaev , Lyudmila S. Mihaylova

This paper presents a method for time-lapse 3D cell analysis. Specifically, we consider the problem of accurately localizing and quantitatively analyzing sub-cellular features, and for tracking individual cells from time-lapse 3D confocal…

计算机视觉与模式识别 · 计算机科学 2022-08-18 Jiaxiang Jiang , Amil Khan , S. Shailja , Samuel A. Belteton , Michael Goebel , Daniel B. Szymanski , B. S. Manjunath

Image segmentation is considered to be one of the critical tasks in hyperspectral remote sensing image processing. Recently, convolutional neural network (CNN) has established itself as a powerful model in segmentation and classification by…

计算机视觉与模式识别 · 计算机科学 2017-12-29 Fahim Irfan Alam , Jun Zhou , Alan Wee-Chung Liew , Xiuping Jia , Jocelyn Chanussot , Yongsheng Gao

Segmentation of histopathology sections is an ubiquitous requirement in digital pathology and due to the large variability of biological tissue, machine learning techniques have shown superior performance over standard image processing…

计算机视觉与模式识别 · 计算机科学 2017-10-11 Philipp Kainz , Michael Pfeiffer , Martin Urschler

Carotid artery vessel wall thickness measurement is an essential step in the monitoring of patients with atherosclerosis. This requires accurate segmentation of the vessel wall, i.e., the region between an artery's lumen and outer wall, in…

图像与视频处理 · 电气工程与系统科学 2021-12-03 Dieuwertje Alblas , Christoph Brune , Jelmer M. Wolterink

This paper presents a comprehensive survey on deep learning-based image watermarking, a technique that entails the invisible embedding and extraction of watermarks within a cover image, aiming to offer a seamless blend of robustness and…

多媒体 · 计算机科学 2023-10-31 Xin Zhong , Arjon Das , Fahad Alrasheedi , Abdullah Tanvir

We introduce an approach to integrate segmentation information within a convolutional neural network (CNN). This counter-acts the tendency of CNNs to smooth information across regions and increases their spatial precision. To obtain…

计算机视觉与模式识别 · 计算机科学 2017-08-16 Adam W. Harley , Konstantinos G. Derpanis , Iasonas Kokkinos

Convolutional neural networks (CNNs) have shown promising results on several segmentation tasks in magnetic resonance (MR) images. However, the accuracy of CNNs may degrade severely when segmenting images acquired with different scanners…

机器学习 · 统计学 2018-05-28 Neerav Karani , Krishna Chaitanya , Christian Baumgartner , Ender Konukoglu

Two successful approaches for the segmentation of biomedical images are (1) the selection of segment candidates from a merge-tree, and (2) the clustering of small superpixels by solving a Multi-Cut problem. In this paper, we introduce a…

计算机视觉与模式识别 · 计算机科学 2017-07-05 Jan Funke , Chong Zhang , Tobias Pietzsch , Stephan Saalfeld

In this work, we explore the intersection of sparse coding theory and deep learning to enhance our understanding of feature extraction capabilities in advanced neural network architectures. We begin by introducing a novel class of Deep…

机器学习 · 计算机科学 2025-12-05 Jianfei Li , Han Feng , Ding-Xuan Zhou

Tracking cells in 3D at high speed continues to attract extensive attention for many biomedical applications, such as monitoring immune cell migration and observing tumor metastasis in flowing blood vessels. Here, we propose a deep…

光学 · 物理学 2018-05-16 Kan Liu , Hui Qiao , Jiamin Wu , Haoqian Wang , Lu Fang , Qionghai Dai

Accurately counting the number of cells in microscopy images is required in many medical diagnosis and biological studies. This task is tedious, time-consuming, and prone to subjective errors. However, designing automatic counting methods…

图像与视频处理 · 电气工程与系统科学 2020-11-11 Shenghua He , Kyaw Thu Minn , Lilianna Solnica-Krezel , Mark A. Anastasio , Hua Li

Image segmentation is the process of partitioning an image into meaningful segments. The meaning of the segments is subjective due to the definition of homogeneity is varied based on the users perspective hence the automation of the…

计算机视觉与模式识别 · 计算机科学 2018-10-12 Ravimal Bandara

Accurate segmentation of medical images is an important step towards analyzing and tracking disease related morphological alterations in the anatomy. Convolutional neural networks (CNNs) have recently emerged as a powerful tool for many…

计算机视觉与模式识别 · 计算机科学 2018-07-25 Jana Kemnitz , Christian F. Baumgartner , Wolfgang Wirth , Felix Eckstein , Sebastian K. Eder , Ender Konukoglu

Early detection of skin cancer relies on precise segmentation of dermoscopic images of skin lesions. However, this task is challenging due to the irregular shape of the lesion, the lack of sharp borders, and the presence of artefacts such…

图像与视频处理 · 电气工程与系统科学 2024-08-20 Shahzaib Iqbal , Muhammad Zeeshan , Mehwish Mehmood , Tariq M. Khan , Imran Razzak

Scaling CNN training is necessary to keep up with growing datasets and reduce training time. We also see an emerging need to handle datasets with very large samples, where memory requirements for training are large. Existing training…

分布式、并行与集群计算 · 计算机科学 2019-03-18 Nikoli Dryden , Naoya Maruyama , Tom Benson , Tim Moon , Marc Snir , Brian Van Essen

Many neuroscientific applications require robust and accurate localization of neurons. It is still an unsolved problem because of the enormous variation in intensity, texture, spatial overlap, morphology and background artifacts. In…

定量方法 · 定量生物学 2021-03-22 Tamal Batabyal , Aijaz Ahmad Naik , Daniel Weller , Jaideep Kapur

Separating and labeling each instance of a nucleus (instance-aware segmentation) is the key challenge in segmenting single cell nuclei on fluorescence microscopy images. Deep Neural Networks can learn the implicit transformation of a…

计算机视觉与模式识别 · 计算机科学 2021-08-11 Florian Kromp , Lukas Fischer , Eva Bozsaky , Inge Ambros , Wolfgang Doerr , Sabine Taschner-Mandl , Peter Ambros , Allan Hanbury

Model checking, a formal verification technique, ensures systems meet predefined requirements, playing a crucial role in minimizing errors and enhancing quality during development. This paper introduces a novel hybrid framework integrating…

计算机视觉与模式识别 · 计算机科学 2025-05-01 Elhoucine Elfatimi , Lahcen El Fatimi , Hanifa Bouchaneb