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Graphs are fundamental data structures which concisely capture the relational structure in many important real-world domains, such as knowledge graphs, physical and social interactions, language, and chemistry. Here we introduce a powerful…

机器学习 · 计算机科学 2018-03-12 Yujia Li , Oriol Vinyals , Chris Dyer , Razvan Pascanu , Peter Battaglia

Deep learning can be used to extract meaningful results from images. In this paper, we used convolutional neural networks combined with recurrent neural networks on images of plasmonic structures and extract absorption data form them. To…

计算机视觉与模式识别 · 计算机科学 2018-05-02 Iman Sajedian , Jeonghyun Kim , Junsuk Rho

Node embeddings map graph vertices into low-dimensional Euclidean spaces while preserving structural information. They are central to tasks such as node classification, link prediction, and signal reconstruction. A key goal is to design…

机器学习 · 计算机科学 2026-02-18 Valentin de Bassompierre , Jean-Charles Delvenne , Laurent Jacques

In this work, we characterize the performance of a deep convolutional neural network designed to detect and quantify chemical elements in experimental X-ray photoelectron spectroscopy data. Given the lack of a reliable database in…

无序系统与神经网络 · 物理学 2019-09-13 Giovanni Drera , Chahan M. Kropf , Luigi Sangaletti

Explainable artificial intelligence (XAI) is an important area in the AI community, and interpretability is crucial for building robust and trustworthy AI models. While previous work has explored model-level and instance-level explainable…

机器学习 · 计算机科学 2025-12-05 Xudong Wang , Ziheng Sun , Chris Ding , Jicong Fan

The graph data structure is a staple in mathematics, yet graph-based machine learning is a relatively green field within the domain of data science. Recent advances in graph-based ML and open source implementations of relevant algorithms…

机器学习 · 计算机科学 2021-04-06 Keenan Venuti

In this work, we have developed CuXASNet, a dense neural network that predicts simulated Cu L-edge X-ray absorption spectra (XAS) from atomic structures. Featurization of the Cu local environment is performed using a component of M3GNet, a…

材料科学 · 物理学 2024-12-05 Samuel P. Gleason , Matthew R. Carbone , Deyu Lu , Jim Ciston

Simulation of spectra of x-ray absorption spectroscopy (XAS) at the L-edge is a well-established and reliable computational tool that, in combination with experimental measurements, reveals details about the local electronic structure and…

材料科学 · 物理学 2021-07-29 Johann Lueder

Advances in deep learning models have revolutionized the study of biomolecule systems and their mechanisms. Graph representation learning, in particular, is important for accurately capturing the geometric information of biomolecules at…

定量方法 · 定量生物学 2023-04-07 Xinye Xiong , Bingxin Zhou , Yu Guang Wang

Interpretable graph neural networks (XGNNs ) are widely adopted in various scientific applications involving graph-structured data. Existing XGNNs predominantly adopt the attention-based mechanism to learn edge or node importance for…

机器学习 · 计算机科学 2024-06-13 Yongqiang Chen , Yatao Bian , Bo Han , James Cheng

Atmospheric retrieval determines the properties of an atmosphere based on its measured spectrum. The low signal-to-noise ratio of exoplanet observations require a Bayesian approach to determine posterior probability distributions of each…

Deep learning frameworks have become powerful tools for approaching scientific problems such as turbulent flow, which has wide-ranging applications. In practice, however, existing scientific machine learning approaches have difficulty…

机器学习 · 计算机科学 2024-07-25 Jakin Ng , Yongji Wang , Ching-Yao Lai

Recent advances in artificial intelligence have propelled the development of innovative computational materials modeling and design techniques. Generative deep learning models have been used for molecular representation, discovery, and…

化学物理 · 物理学 2021-02-12 Navid Shervani-Tabar , Nicholas Zabaras

Prediction accuracy and model explainability are the two most important objectives when developing machine learning algorithms to solve real-world problems. The neural networks are known to possess good prediction performance, but lack of…

机器学习 · 统计学 2019-09-04 Zebin Yang , Aijun Zhang , Agus Sudjianto

Machine learning algorithms based on artificial neural networks have proven very useful for a variety of classification problems. Here we apply them to a well-known problem in crystallography, namely the classification of X-ray diffraction…

无序系统与神经网络 · 物理学 2019-06-19 Pascal Marc Vecsei , Kenny Choo , Johan Chang , Titus Neupert

Prediction of molecular properties, including physico-chemical properties, is a challenging task in chemistry. Herein we present a new state-of-the-art multitask prediction method based on existing graph neural network models. We have used…

机器学习 · 计算机科学 2019-10-31 Fabio Capela , Vincent Nouchi , Ruud Van Deursen , Igor V. Tetko , Guillaume Godin

Radio-Frequency (RF) imaging concerns the digital recreation of the surfaces of scene objects based on the scattered field at distributed receivers. To solve this difficult inverse scattering problems, data-driven methods are often employed…

Graphs as a type of data structure have recently attracted significant attention. Representation learning of geometric graphs has achieved great success in many fields including molecular, social, and financial networks. It is natural to…

机器学习 · 计算机科学 2021-07-08 Tian Xia , Wei-Shinn Ku

This study presents a deep learning approach to predicting structural and electronic properties of materials using Graph Neural Networks (GNNs). Leveraging data from the Materials Project database, we construct graph representations of…

无序系统与神经网络 · 物理学 2024-12-20 Selva Chandrasekaran Selvaraj

Recent machine learning methods make it possible to model potential energy of atomic configurations with chemical-level accuracy (as calculated from ab-initio calculations) and at speeds suitable for molecular dynam- ics simulation. Best…

计算物理 · 物理学 2017-05-03 G. Ferré , T. Haut , K. Barros