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Although deep learning (DL) shows powerful potential in cell segmentation tasks, it suffers from poor generalization as DL-based methods originally simplified cell segmentation in detecting cell membrane boundary, lacking prominent cellular…

图像与视频处理 · 电气工程与系统科学 2023-03-22 Fang Hu , Xuexue Sun , Ke Qing , Fenxi Xiao , Zhi Wang , Xiaolu Fan

Automated nodule segmentation is essential for computer-assisted diagnosis in ultrasound images. Nevertheless, most existing methods depend on precise pixel-level annotations by medical professionals, a process that is both costly and…

计算机视觉与模式识别 · 计算机科学 2024-07-19 Xingyue Zhao , Peiqi Li , Xiangde Luo , Meng Yang , Shi Chang , Zhongyu Li

Cell classification and counting in immunohistochemical cytoplasm staining images play a pivotal role in cancer diagnosis. Weakly supervised learning is a potential method to deal with labor-intensive labeling. However, the inconstant cell…

图像与视频处理 · 电气工程与系统科学 2022-03-01 Shichuan Zhang , Chenglu Zhu , Honglin Li , Jiatong Cai , Lin Yang

The rapid development of deep learning has driven significant progress in image semantic segmentation - a fundamental task in computer vision. Semantic segmentation algorithms often depend on the availability of pixel-level labels (i.e.,…

计算机视觉与模式识别 · 计算机科学 2024-12-03 Zhaozheng Chen , Qianru Sun

Semantic segmentation is a critical step in automated image interpretation and analysis where pixels are classified into one or more predefined semantically meaningful classes. Deep learning approaches for semantic segmentation rely on…

计算机视觉与模式识别 · 计算机科学 2023-07-10 Tushar Kataria , Beatrice Knudsen , Shireen Elhabian

Image segmentation is a fundamental problem in biomedical image analysis. Recent advances in deep learning have achieved promising results on many biomedical image segmentation benchmarks. However, due to large variations in biomedical…

计算机视觉与模式识别 · 计算机科学 2017-06-16 Lin Yang , Yizhe Zhang , Jianxu Chen , Siyuan Zhang , Danny Z. Chen

Deep convolutional neural networks have shown outstanding performance in medical image segmentation tasks. The usual problem when training supervised deep learning methods is the lack of labeled data which is time-consuming and costly to…

计算机视觉与模式识别 · 计算机科学 2021-03-04 Suman Sedai , Bhavna Antony , Ravneet Rai , Katie Jones , Hiroshi Ishikawa , Joel Schuman , Wollstein Gadi , Rahil Garnavi

Cell boundary information is crucial for analyzing cell behaviors from time-lapse microscopy videos. Existing supervised cell segmentation tools, such as ImageJ, require tuning various parameters and rely on restrictive assumptions about…

应用统计 · 统计学 2026-01-27 Laura Baracaldo , Blythe King , Haoran Yan , Yizi Lin , Nina Miolane , Mengyang Gu

Weakly-supervised semantic segmentation (WSSS) with image-level labels has been widely studied to relieve the annotation burden of the traditional segmentation task. In this paper, we show that existing fully-annotated base categories can…

计算机视觉与模式识别 · 计算机科学 2022-10-18 Siyuan Zhou , Li Niu , Jianlou Si , Chen Qian , Liqing Zhang

Nuclei segmentation is one of the important tasks for whole slide image analysis in digital pathology. With the drastic advance of deep learning, recent deep networks have demonstrated successful performance of the nuclei segmentation task.…

计算机视觉与模式识别 · 计算机科学 2019-07-23 Inwan Yoo , Donggeun Yoo , Kyunghyun Paeng

Dense annotations, such as segmentation masks, are expensive and time-consuming to obtain, especially for 3D medical images where expert voxel-wise labeling is required. Weakly supervised approaches aim to address this limitation, but often…

计算机视觉与模式识别 · 计算机科学 2026-04-21 Richard Petersen , Fredrik Kahl , Jennifer Alvén

Accurate cell segmentation in pathology images typically requires dense pixel-wise annotations, which are costly and time-consuming to obtain. This challenge is especially important for emerging biological imaging modalities and multiplexed…

计算机视觉与模式识别 · 计算机科学 2026-05-26 Gunjan Shrivastava , Saad Nadeem

Histopathological image segmentation is a challenging and important topic in medical imaging with tremendous potential impact in clinical practice. State of the art methods rely on hand-crafted annotations which hinder clinical translation…

Since the preparation of labeled data for training semantic segmentation networks of point clouds is a time-consuming process, weakly supervised approaches have been introduced to learn from only a small fraction of data. These methods are…

计算机视觉与模式识别 · 计算机科学 2022-09-16 Gengxin Liu , Oliver van Kaick , Hui Huang , Ruizhen Hu

Accurate delineation of individual cells in microscopy videos is essential for studying cellular dynamics, yet separating touching or overlapping instances remains a persistent challenge. Although foundation-model for segmentation such as…

计算机视觉与模式识别 · 计算机科学 2026-03-24 Thomas Mendelson , Joshua Francois , Galit Lahav , Tammy Riklin-Raviv

State-of-the-art learning based boundary detection methods require extensive training data. Since labelling object boundaries is one of the most expensive types of annotations, there is a need to relax the requirement to carefully annotate…

计算机视觉与模式识别 · 计算机科学 2015-11-25 Anna Khoreva , Rodrigo Benenson , Mohamed Omran , Matthias Hein , Bernt Schiele

Cellular electron cryo-tomography enables the 3D visualization of cellular organization in the near-native state and at submolecular resolution. However, the contents of cellular tomograms are often complex, making it difficult to…

定量方法 · 定量生物学 2017-12-29 Xiangrui Zeng , Miguel Ricardo Leung , Tzviya Zeev-Ben-Mordehai , Min Xu

Eye gaze that reveals human observational patterns has increasingly been incorporated into solutions for vision tasks. Despite recent explorations on leveraging gaze to aid deep networks, few studies exploit gaze as an efficient annotation…

计算机视觉与模式识别 · 计算机科学 2024-07-11 Yuan Zhong , Chenhui Tang , Yumeng Yang , Ruoxi Qi , Kang Zhou , Yuqi Gong , Pheng Ann Heng , Janet H. Hsiao , Qi Dou

Deep learning (DL) has arguably emerged as the method of choice for the detection and segmentation of biological structures in microscopy images. However, DL typically needs copious amounts of annotated training data that is for biomedical…

图像与视频处理 · 电气工程与系统科学 2020-03-20 Mangal Prakash , Tim-Oliver Buchholz , Manan Lalit , Pavel Tomancak , Florian Jug , Alexander Krull

There are many approaches to weakly-supervised training of networks to segment 2D images. By contrast, existing approaches to segmenting volumetric images rely on full-supervision of a subset of 2D slices of the 3D volume. We propose an…

计算机视觉与模式识别 · 计算机科学 2022-06-06 Udaranga Wickramasinghe , Patrick M. Jensen , Mian Shah , Jiancheng Yang , Pascal Fua