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Studying the morphological development of cartilaginous and osseous structures is critical to the early detection of life-threatening skeletal dysmorphology. Embryonic cartilage undergoes rapid structural changes within hours, introducing…

Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for volume, thickness and shape measurements. This work introduces a new highly accurate and versatile method based on 3D convolutional neural…

定量方法 · 定量生物学 2019-02-07 Philip Novosad , Vladimir Fonov , D. Louis Collins

Segmentation of the left atrium and deriving its size can help to predict and detect various cardiovascular conditions. Automation of this process in 3D Ultrasound image data is desirable, since manual delineations are time-consuming,…

计算机视觉与模式识别 · 计算机科学 2019-04-19 Markus A. Degel , Nassir Navab , Shadi Albarqouni

We introduce deep neural networks for the analysis of anatomical shapes that learn a low-dimensional shape representation from the given task, instead of relying on hand-engineered representations. Our framework is modular and consists of…

计算机视觉与模式识别 · 计算机科学 2020-10-05 Benjamin Gutierrez Becker , Ignacio Sarasua , Christian Wachinger

Deep convolutional neural networks (CNNs) are state-of-the-art for semantic image segmentation, but typically require many labeled training samples. Obtaining 3D segmentations of medical images for supervised training is difficult and labor…

计算机视觉与模式识别 · 计算机科学 2019-07-29 Zhenlin Xu , Marc Niethammer

Segmentation is considered to be a very crucial task in medical image analysis. This task has been easier since deep learning models have taken over with its high performing behavior. However, deep learning models dependency on large data…

图像与视频处理 · 电气工程与系统科学 2021-05-26 Mst. Tasnim Pervin , Linmi Tao , Aminul Huq , Zuoxiang He , Li Huo

Deep learning based generative adversarial networks (GAN) can effectively perform image reconstruction with under-sampled MR data. In general, a large number of training samples are required to improve the reconstruction performance of a…

图像与视频处理 · 电气工程与系统科学 2021-05-19 Jun Lv , Guangyuan Li , Xiangrong Tong , Weibo Chen , Jiahao Huang , Chengyan Wang , Guang Yang

Polyp segmentation is a crucial step towards computer-aided diagnosis of colorectal cancer. However, most of the polyp segmentation methods require pixel-wise annotated datasets. Annotated datasets are tedious and time-consuming to produce,…

计算机视觉与模式识别 · 计算机科学 2022-11-23 Guangyu Ren , Michalis Lazarou , Jing Yuan , Tania Stathaki

Whole-heart multi-compartment CT segmentation is clinically important, but standard CNNs do not explicitly enforce anatomical plausibility. Based on statistics derived from the training data, we evaluate whether lightweight explicit shape…

图像与视频处理 · 电气工程与系统科学 2026-05-18 Michael Hudler , Franz Thaler , Martin Urschler

The 3D morphology and quantitative assessment of knee articular cartilages (i.e., femoral, tibial, and patellar cartilage) in magnetic resonance (MR) imaging is of great importance for knee radiographic osteoarthritis (OA) diagnostic…

图像与视频处理 · 电气工程与系统科学 2019-08-14 Chaowei Tan , Zhennan Yan , Shaoting Zhang , Kang Li , Dimitris N. Metaxas

Medical images used in clinical practice are heterogeneous and not the same quality as scans studied in academic research. Preprocessing breaks down in extreme cases when anatomy, artifacts, or imaging parameters are unusual or protocols…

图像与视频处理 · 电气工程与系统科学 2022-08-31 Mostafa Mehdipour Ghazi , Mads Nielsen

We propose a segmentation framework that uses deep neural networks and introduce two innovations. First, we describe a biophysics-based domain adaptation method. Second, we propose an automatic method to segment white and gray matter, and…

计算机视觉与模式识别 · 计算机科学 2018-10-16 Amir Gholami , Shashank Subramanian , Varun Shenoy , Naveen Himthani , Xiangyu Yue , Sicheng Zhao , Peter Jin , George Biros , Kurt Keutzer

Deep learning techniques have achieved superior performance in computer-aided medical image analysis, yet they are still vulnerable to imperceptible adversarial attacks, resulting in potential misdiagnosis in clinical practice. Oppositely,…

图像与视频处理 · 电气工程与系统科学 2024-11-05 Junhao Dong , Junxi Chen , Xiaohua Xie , Jianhuang Lai , Hao Chen

As recent advances in AI are causing the decline of conventional diagnostic methods, the realization of end-to-end diagnosis is fast approaching. Ultrasound image segmentation is an important step in the diagnostic process. An accurate and…

计算机视觉与模式识别 · 计算机科学 2023-08-30 Yuhan Song , Armagan Elibol , Nak Young Chong

Statistical shape modeling (SSM) is an enabling quantitative tool to study anatomical shapes in various medical applications. However, directly using 3D images in these applications still has a long way to go. Recent deep learning methods…

计算机视觉与模式识别 · 计算机科学 2023-10-04 Abu Zahid Bin Aziz , Jadie Adams , Shireen Elhabian

Brain tumor segmentation is often based on multiple magnetic resonance imaging (MRI). However, in clinical practice, certain modalities of MRI may be missing, which presents a more difficult scenario. To cope with this challenge, Knowledge…

计算机视觉与模式识别 · 计算机科学 2024-08-20 Tianyi Liu , Zhaorui Tan , Muyin Chen , Xi Yang , Haochuan Jiang , Kaizhu Huang

Deep models suffer from limited generalization capability to unseen domains, which has severely hindered their clinical applicability. Specifically for the retinal vessel segmentation task, although the model is supposed to learn the…

计算机视觉与模式识别 · 计算机科学 2023-09-06 Dewei Hu , Hao Li , Han Liu , Xing Yao , Jiacheng Wang , Ipek Oguz

Degeneration of articular cartilage (AC) is actively studied in knee osteoarthritis (OA) research via magnetic resonance imaging (MRI). Segmentation of AC tissues from MRI data is an essential step in quantification of their damage. Deep…

图像与视频处理 · 电气工程与系统科学 2024-08-07 Egor Panfilov , Aleksei Tiulpin , Stefan Klein , Miika T. Nieminen , Simo Saarakkala

CT organ segmentation on computed tomography (CT) images becomes a significant brick for modern medical image analysis, supporting clinic workflows in multiple domains. Previous segmentation methods include 2D convolution neural networks…

图像与视频处理 · 电气工程与系统科学 2022-04-19 Haoyu Fang , Yi Fang , Xiaofeng Yang

Adversarial learning has been proven to be effective for capturing long-range and high-level label consistencies in semantic segmentation. Unique to medical imaging, capturing 3D semantics in an effective yet computationally efficient way…

计算机视觉与模式识别 · 计算机科学 2019-06-12 Naji Khosravan , Aliasghar Mortazi , Michael Wallace , Ulas Bagci