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The fluid-structure interactions between flexible fibers and viscous flows play an essential role in various biological phenomena, medical problems, and industrial processes. Of particular interest is the case of particles freely…

流体动力学 · 物理学 2023-02-01 Francesco Bonacci , Brato Chakrabarti , David Saintillan , Olivia du Roure , Anke Lindner

The mechanical properties of actin filaments are essential to their biological functions. Here, we introduce a highly coarse-grained model of actin filaments that preserves helicity and chirality while enabling mesoscale simulations. The…

生物物理 · 物理学 2026-01-01 Amir Khosravanizadeh , François Nédélec , Serge Dmitrieff

The morphological dynamics, instabilities and transitions of elastic filaments in viscous flows underlie a wealth of biophysical processes from flagellar propulsion to intracellular streaming, and are also key to deciphering the rheological…

流体动力学 · 物理学 2018-11-09 Yanan Liu , Brato Chakrabarti , David Saintillan , Anke Lindner , Olivia du Roure

We study the emergence of helical structures subjected to a stretching force, demonstrating that the force transforms disk-shaped colloidal membranes into twisted chiral ribbons of predetermined handedness. Using an experimental technique…

软凝聚态物质 · 物理学 2020-07-08 Andrew Balchunas , Leroy L. Jia , Mark Zakhary , Zvonimir Dogic , Robert A. Pelcovits , Thomas R. Powers

While semi-flexible polymers and fibers are an important class of material due to their rich mechanical properties, it remains unclear how these properties relate to the microscopic conformation of the polymers. Actin filaments constitute…

We study how the three-dimensional shape of rigid filaments determines the microscopic dynamics and macroscopic rheology of entangled semi-dilute Brownian suspensions. To control the filament shape we use bacterial flagella, which are…

Molecular chirality frustrates the two-dimensional assembly of filamentous molecules, a fact that reflects the generic impossibility of imposing a global twisting of layered materials. We explore the consequences of this frustration for…

软凝聚态物质 · 物理学 2015-05-13 Gregory M. Grason

The conformations of semiflexible (bio)polymers are studied in flow through geometrically structured microchannels. Using mesoscale hydrodynamics simulations, we show that the polymer undergoes a rod-to-helix transition as it moves from the…

软凝聚态物质 · 物理学 2012-10-24 Raghunath Chelakkot , Roland G. Winkler , Gerhard Gompper

We analyze experimentally the shape of a long elastic filament rotating in a viscous liquid. We identify a continuous but sharp transition from a straight to an helical shape, resulting from the competition between viscous stresses and…

流体动力学 · 物理学 2009-11-13 Naïs Coq , Olivia Du Roure , Joel Marthelot , Denis Bartolo , Marc Fermigier

In this work we study the dynamical buckling process of a thin filament immersed in a high viscous medium. We perform an experimental study to track the shape evolution of the filament during a constant velocity compression. Numerical…

软凝聚态物质 · 物理学 2019-04-03 A. G. Monastra , M. F. Carusela , G. van der Velde , M. V. D'Angelo , L. Bruno

Living systems are chiral on multiple scales, from constituent biopolymers to large scale morphology, and their active mechanics is both driven by chiral components and serves to generate chiral morphologies. We describe the mechanics of…

软凝聚态物质 · 物理学 2023-07-03 Sami C. Al-Izzi , Gareth P. Alexander

Flexible filaments moving in viscous fluids are ubiquitous in the natural microscopic world. For example, the swimming of bacteria and spermatozoa as well as important physiological functions at organ-level, such as the cilia-induced motion…

软凝聚态物质 · 物理学 2019-06-05 Panayiota Katsamba , Eric Lauga

We use numerical simulations to show how a fully flexible filament binding to a deformable cylindrical surface may acquire a macroscopic persistence length and a helical conformation. This is a result of the nontrivial elastic response to…

软凝聚态物质 · 物理学 2015-03-17 Andela Šarić , Josep C. Pàmies , Angelo Cacciuto

Chirality plays a crucial role in determining the structure of many systems in nature. Twisted or helical aggregates as a consequence of self-assembly can be seen in many biological and synthetic materials. Despite extensive theoretical and…

软凝聚态物质 · 物理学 2026-05-27 Sayantan Mondal , Jayashree Saha

Helically coiled filaments are a frequent motif in nature. In situations commonly encountered in experiments coiled helices are squeezed flat onto two dimensional surfaces. Under such 2-D confinement helices form "squeelices" - peculiar…

软凝聚态物质 · 物理学 2015-06-05 Gi-Moon Nam , Nam-Kyung Lee , Hervé Mohrbach , Albert Johner , Igor M. Kulić

Motivated to understand the behavior of biological filaments interacting with membranes of various types, we study a theoretical model for the shape and thermodynamics of intrinsically-helical filaments bound to curved membranes. We show…

软凝聚态物质 · 物理学 2016-11-03 D. A. Quint , A. Gopinathan , G. M. Grason

We investigate the sedimentation of chiral particles in viscous fluid flow. We identify helical ribbons as simple particles with strong translation-rotation coupling whose symmetry ensures that the centers of mass, buoyancy, resistance, and…

Using Langevin simulations, we find that simple 'generic' bead-and-spring homopolymer chains in a sufficiently bad solvent spontaneously develop helical order during the process of collapsing from an initially stretched conformation. The…

软凝聚态物质 · 物理学 2008-03-10 Sid Ahmed Sabeur , Fatima Hamdache , Friederike Schmid

We investigate the emergence of chiral meso-structures in one-dimensional fluids consisting of stacked discotic particles and demonstrate that helical undulations are generated spontaneously from internal elastic stresses. The stability of…

软凝聚态物质 · 物理学 2015-06-11 L. Morales-Anda , H. H. Wensink

The shape of the building blocks plays a crucial role in directing self-assembly towards desired architectures. Out of the many different shapes, helix has a unique position. Helical structures are ubiquitous in nature and a helical shape…

软凝聚态物质 · 物理学 2016-04-27 Hima Bindu Kolli , Giorgio Cinacchi , Alberta Ferrarini , Achille Giacometti
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