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Representation learning is the first step in automating tasks such as research paper recommendation, classification, and retrieval. Due to the accelerating rate of research publication, together with the recognised benefits of…

数字图书馆 · 计算机科学 2023-03-22 Eoghan Cunningham , Derek Greene

Gene expression datasets offer insights into gene regulation mechanisms, biochemical pathways, and cellular functions. Additionally, comparing gene expression profiles between disease and control patients can deepen the understanding of…

机器学习 · 计算机科学 2025-03-27 Rita T. Sousa , Heiko Paulheim

Although product graphs (PGs) have gained increasing attentions in recent years for their successful applications in product search and recommendations, the extensive power of PGs can be limited by the inevitable involvement of various…

社会与信息网络 · 计算机科学 2022-02-22 Kewei Cheng , Xian Li , Yifan Ethan Xu , Xin Luna Dong , Yizhou Sun

Embedding learning, a.k.a. representation learning, has been shown to be able to model large-scale semantic knowledge graphs. A key concept is a mapping of the knowledge graph to a tensor representation whose entries are predicted by models…

机器学习 · 计算机科学 2015-12-23 Cristóbal Esteban , Volker Tresp , Yinchong Yang , Stephan Baier , Denis Krompaß

Knowledge graph embedding aims at offering a numerical knowledge representation paradigm by transforming the entities and relations into continuous vector space. However, existing methods could not characterize the knowledge graph in a fine…

人工智能 · 计算机科学 2017-06-20 Han Xiao , Minlie Huang , Xiaoyan Zhu

Electronic Health Records (EHR) have been heavily used in modern healthcare systems for recording patients' admission information to hospitals. Many data-driven approaches employ temporal features in EHR for predicting specific diseases,…

机器学习 · 计算机科学 2021-12-07 Chang Lu , Chandan K. Reddy , Yue Ning

Knowledge graphs have emerged as fundamental structures for representing complex relational data across scientific and enterprise domains. However, existing embedding methods face critical limitations when modeling diverse relationship…

人工智能 · 计算机科学 2025-11-17 Jugal Gajjar , Kaustik Ranaware , Kamalasankari Subramaniakuppusamy , Vaibhav Gandhi

The way we analyse clinical texts has undergone major changes over the last years. The introduction of language models such as BERT led to adaptations for the (bio)medical domain like PubMedBERT and ClinicalBERT. These models rely on large…

计算与语言 · 计算机科学 2023-09-15 Tom van Sonsbeek , Xiantong Zhen , Marcel Worring

Knowledge bases often consist of facts which are harvested from a variety of sources, many of which are noisy and some of which conflict, resulting in a level of uncertainty for each triple. Knowledge bases are also often incomplete,…

人工智能 · 计算机科学 2021-04-13 Xuelu Chen , Michael Boratko , Muhao Chen , Shib Sankar Dasgupta , Xiang Lorraine Li , Andrew McCallum

A large-scale knowledge graph enhances reproducibility in biomedical data discovery by providing a standardized, integrated framework that ensures consistent interpretation across diverse datasets. It improves generalizability by connecting…

统计方法学 · 统计学 2024-10-11 Suqi Liu , Tianxi Cai , Xiaoou Li

Numeric values associated to edges of a knowledge graph have been used to represent uncertainty, edge importance, and even out-of-band knowledge in a growing number of scenarios, ranging from genetic data to social networks. Nevertheless,…

人工智能 · 计算机科学 2021-05-19 Sumit Pai , Luca Costabello

We have created a knowledge graph based on major data sources used in ecotoxicological risk assessment. We have applied this knowledge graph to an important task in risk assessment, namely chemical effect prediction. We have evaluated nine…

人工智能 · 计算机科学 2022-03-31 Erik B. Myklebust , Ernesto Jiménez-Ruiz , Jiaoyan Chen , Raoul Wolf , Knut Erik Tollefsen

Extensive adoption of electronic health records (EHRs) offers opportunities for their use in various downstream clinical analyses. To accomplish this purpose, enriching an EHR cohort with external knowledge (e.g., standardized medical…

机器学习 · 计算机科学 2024-06-13 Ahmad Wisnu Mulyadi , Heung-Il Suk

Statistical information is ubiquitous but drawing valid conclusions from it is prohibitively hard. We explain how knowledge graph embeddings can be used to approximate probabilistic inference efficiently using the example of Statistical EL…

人工智能 · 计算机科学 2024-07-17 Yuqicheng Zhu , Nico Potyka , Bo Xiong , Trung-Kien Tran , Mojtaba Nayyeri , Evgeny Kharlamov , Steffen Staab

Medical decision-making requires integrating diverse medical information, from imaging to clinical narratives. These medical modalities are often acquired in a many-to-many manner. However, current medical vision-language pretraining models…

计算机视觉与模式识别 · 计算机科学 2025-10-01 Yuan Gao , Sangwook Kim , Jianzhong You , Chris McIntosh

Complex node interactions are common in knowledge graphs, and these interactions also contain rich knowledge information. However, traditional methods usually treat a triple as a training unit during the knowledge representation learning…

计算与语言 · 计算机科学 2021-10-01 Bin He , Di Zhou , Jinghui Xiao , Xin jiang , Qun Liu , Nicholas Jing Yuan , Tong Xu

Knowledge Graphs (KGs), representing facts as triples, have been widely adopted in many applications. Reasoning tasks such as link prediction and rule induction are important for the development of KGs. Knowledge Graph Embeddings (KGEs)…

人工智能 · 计算机科学 2021-12-17 Wen Zhang , Shumin Deng , Mingyang Chen , Liang Wang , Qiang Chen , Feiyu Xiong , Xiangwen Liu , Huajun Chen

Machine learning, deep learning, and NLP methods on knowledge graphs are present in different fields and have important roles in various domains from self-driving cars to friend recommendations on social media platforms. However, to apply…

机器学习 · 计算机科学 2024-09-25 Elika Bozorgi , Sakher Khalil Alqaiidi , Afsaneh Shams , Hamid Reza Arabnia , Krzysztof Kochut

Entities may have complex interactions in a knowledge graph (KG), such as multi-step relationships, which can be viewed as graph contextual information of the entities. Traditional knowledge representation learning (KRL) methods usually…

计算与语言 · 计算机科学 2020-12-08 Bin He , Di Zhou , Jing Xie , Jinghui Xiao , Xin Jiang , Qun Liu

Deep metric learning is often used to learn an embedding function that captures the semantic differences within a dataset. A key factor in many problem domains is how this embedding generalizes to new classes of data. In observing many…

机器学习 · 计算机科学 2019-09-18 Xiaotong Liu , Hong Xuan , Zeyu Zhang , Abby Stylianou , Robert Pless