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This study investigates the role of spatial segregation, prompted by competition avoidance, as a key mechanism for emergent coexistence within microbial communities. Recognizing these communities as complex adaptive systems, we challenge…

物理与社会 · 物理学 2024-03-12 Mattia Mattei , Alex Arenas

Microscopic strategy update rules play an important role in the evolutionary dynamics of cooperation among interacting agents on complex networks. Many previous related works only consider one \emph{fixed} rule, while in the real world,…

最优化与控制 · 数学 2023-11-27 Shengxian Wang , Weijia Yao , Ming Cao , Xiaojie Chen

We study distributed agreement in microbial distributed systems under stochastic population dynamics and competitive interactions. Motivated by recent applications in synthetic biology, we examine how the presence and absence of direct…

分布式、并行与集群计算 · 计算机科学 2026-04-10 Victoria Andaur , Janna Burman , Matthias Függer , Manish Kushwaha , Bilal Manssouri , Thomas Nowak , Joel Rybicki

Highly-diverse ecosystems exhibit a broad distribution of population sizes and species turnover, where species at high and low abundances are exchanged over time. We show that these two features generically emerge in the fluctuating phase…

种群与进化 · 定量生物学 2024-01-09 Thibaut Arnoulx de Pirey , Guy Bunin

The persistence of biodiversity of species is a challenging proposition in ecological communities in the face of Darwinian selection. The present article investigates beyond the pairwise competitive interactions and provides a novel…

种群与进化 · 定量生物学 2022-11-09 Sourin Chatterjee , Sayantan Nag Chowdhury , Dibakar Ghosh , Chittaranjan Hens

Many biological populations exhibit diversity in their strategy for survival and reproduction in a given environment, and microbes are an example. We explore the fate of different strategies under sustained environmental change by…

种群与进化 · 定量生物学 2025-09-24 Ruixi Huang , David Waxman

In many social mammals, early life social adversity and social integration largely predict individual health, lifespan and reproductive success. Efforts in identifying the physiological mechanisms mediating the relationship between the…

种群与进化 · 定量生物学 2022-01-25 Alice Baniel , Marie J. E. Charpentier

In nature microbial populations are subject to fluctuating nutrient levels. Nutrient fluctuations are important for evolutionary and ecological dynamics in microbial communities since they impact growth rates, population sizes and biofilm…

种群与进化 · 定量生物学 2018-09-12 Jason Merritt , Seppe Kuehn

A central feature of complex systems is the relevance and entanglement of different levels of description. For instance, the dynamics of ecosystems can be alternatively described in terms of large ecological processes and classes of…

种群与进化 · 定量生物学 2025-10-06 Juan Giral Martínez , Silvia de Monte , Matthieu Barbier

Social ecological systems are often difficult to investigate and manage because of their inherent complexity1. Small variations in external drivers can lead to abrupt changes associated with instabilities and bifurcations in the underlying…

种群与进化 · 定量生物学 2017-02-08 Samir Suweis , Paolo D'Odorico

The stability analysis of socioeconomic systems has been centered on answering whether small perturbations when a system is in a given quantitative state will push the system permanently to a different quantitative state. However, typically…

物理与社会 · 物理学 2014-09-01 Serguei Saavedra , Rudolf P. Rohr , Luis J. Gilarranz , Jordi Bascompte

We study a model ecosystem by means of dynamical techniques from disordered systems theory. The model describes a set of species subject to competitive interactions through a background of resources, which they feed upon. Additionally…

种群与进化 · 定量生物学 2009-11-13 Yoshimi Yoshino , Tobias Galla , Kei Tokita

We consider a model for a population in a heterogeneous environment, with logistic type local population dynamics, under the assumption that individuals can switch between two different nonzero rates of diffusion. Such switching behavior…

偏微分方程分析 · 数学 2020-01-14 Robert Stephen Cantrell , Chris Cosner , Xiao Yu

Microbes can affect processes from food production to human health. Such microbes are not isolated, but rather interact with each other and establish connections with their living environments. Understanding these interactions is essential…

应用统计 · 统计学 2021-09-07 Liang Chen , Qiuyan He , Hui Wan , Shun He , Minghua Deng

The role of species interactions in controlling the interplay between the stability of an ecosystem and its biodiversity is still not well understood. The ability of ecological communities to recover after a small perturbation of the…

The composition of ecological communities varies not only between different locations but also in time. Understanding the fundamental processes that drive species towards rarity or abundance is crucial to assessing ecosystem resilience and…

种群与进化 · 定量生物学 2024-11-22 Emil Mallmin , Arne Traulsen , Silvia De Monte

Interest in the study of in-host microbial communities has increased in recent years due to our improved understanding of the communities' significant role in host health. As a result, the ability to model these communities using…

定量方法 · 定量生物学 2015-09-24 Matthias Chung , Justin Krueger , Mihai Pop

Why are large, complex ecosystems stable? Both theory and simulations of current models predict the onset of instability with growing size and complexity, so for decades it has been conjectured that ecosystems must have some unidentified…

种群与进化 · 定量生物学 2016-08-11 Samuel Johnson , Virginia Domínguez-García , Luca Donetti , Miguel A. Muñoz

Multiple stable states - the coexistence of two or more distinct ecological configurations under identical environmental conditions - have attracted sustained interest in ecology, yet the field still lacks a unified framework connecting…

种群与进化 · 定量生物学 2026-05-08 Jennifer Paige , Denis D. Patterson , Alan Hastings

Microbial dormancy is an evolutionary trait that has emerged independently at various positions across the tree of life. It describes the ability of a microorganism to switch to a metabolically inactive state that can withstand unfavorable…

概率论 · 数学 2020-04-08 Jochen Blath , András Tóbiás