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Motivation: Biological data and knowledge bases increasingly rely on Semantic Web technologies and the use of knowledge graphs for data integration, retrieval and federated queries. In the past years, feature learning methods that are…

In this paper we provide a comprehensive introduction to knowledge graphs, which have recently garnered significant attention from both industry and academia in scenarios that require exploiting diverse, dynamic, large-scale collections of…

Knowledge graph embedding models (KGEMs) developed for link prediction learn vector representations for entities in a knowledge graph, known as embeddings. A common tacit assumption is the KGE entity similarity assumption, which states that…

人工智能 · 计算机科学 2024-03-29 Nicolas Hubert , Heiko Paulheim , Armelle Brun , Davy Monticolo

We examine the impact of incorporating knowledge graph information on the performance of relation extraction models across a range of datasets. Our hypothesis is that the positions of entities within a knowledge graph provide important…

计算与语言 · 计算机科学 2025-06-23 Cedric Möller , Ricardo Usbeck

In order to facilitate the accesses of general users to knowledge graphs, an increasing effort is being exerted to construct graph-structured queries of given natural language questions. At the core of the construction is to deduce the…

人工智能 · 计算机科学 2024-04-01 Ruijie Wang , Meng Wang , Jun Liu , Michael Cochez , Stefan Decker

Knowledge graphs represent real-world entities and their relations in a semantically-rich structure supported by ontologies. Exploring this data with machine learning methods often relies on knowledge graph embeddings, which produce latent…

机器学习 · 计算机科学 2023-06-23 Rita T. Sousa , Sara Silva , Catia Pesquita

Numeric values associated to edges of a knowledge graph have been used to represent uncertainty, edge importance, and even out-of-band knowledge in a growing number of scenarios, ranging from genetic data to social networks. Nevertheless,…

人工智能 · 计算机科学 2021-05-19 Sumit Pai , Luca Costabello

Knowledge graphs are freely aggregated, published, and edited in the Web of data, and thus may overlap. Hence, a key task resides in aligning (or matching) their content. This task encompasses the identification, within an aggregated…

机器学习 · 计算机科学 2021-10-22 Pierre Monnin , Chedy Raïssi , Amedeo Napoli , Adrien Coulet

Minimizing adverse reactions caused by drug-drug interactions has always been a momentous research topic in clinical pharmacology. Detecting all possible interactions through clinical studies before a drug is released to the market is a…

人工智能 · 计算机科学 2018-03-13 Meng Wang

The link prediction task on knowledge graphs without explicit negative triples in the training data motivates the usage of rank-based metrics. Here, we review existing rank-based metrics and propose desiderata for improved metrics to…

机器学习 · 计算机科学 2022-04-20 Charles Tapley Hoyt , Max Berrendorf , Mikhail Galkin , Volker Tresp , Benjamin M. Gyori

We present a family of novel methods for embedding knowledge graphs into real-valued tensors. These tensor-based embeddings capture the ordered relations that are typical in the knowledge graphs represented by semantic web languages like…

机器学习 · 计算机科学 2022-08-25 Ankur Padia , Kostantinos Kalpakis , Francis Ferraro , Tim Finin

Knowledge graph embeddings are now a widely adopted approach to knowledge representation in which entities and relationships are embedded in vector spaces. In this chapter, we introduce the reader to the concept of knowledge graph…

人工智能 · 计算机科学 2020-05-01 Federico Bianchi , Gaetano Rossiello , Luca Costabello , Matteo Palmonari , Pasquale Minervini

Recently, link prediction algorithms based on neural embeddings have gained tremendous popularity in the Semantic Web community, and are extensively used for knowledge graph completion. While algorithmic advances have strongly focused on…

人工智能 · 计算机科学 2020-08-31 Asan Agibetov , Matthias Samwald

Data in Knowledge Graphs often represents part of the current state of the real world. Thus, to stay up-to-date the graph data needs to be updated frequently. To utilize information from Knowledge Graphs, many state-of-the-art machine…

机器学习 · 计算机科学 2021-09-23 Christopher Wewer , Florian Lemmerich , Michael Cochez

Recent studies on knowledge graph embedding focus on mapping entities and relations into low-dimensional vector spaces. While most existing models primarily exploit structural information, knowledge graphs also contain rich contextual and…

计算与语言 · 计算机科学 2025-09-03 Qisong Li , Ji Lin , Sijia Wei , Neng Liu

Inductive knowledge graph completion has been considered as the task of predicting missing triplets between new entities that are not observed during training. While most inductive knowledge graph completion methods assume that all entities…

机器学习 · 计算机科学 2023-08-21 Jaejun Lee , Chanyoung Chung , Joyce Jiyoung Whang

This paper tackles the problem of endogenous link prediction for Knowledge Base completion. Knowledge Bases can be represented as directed graphs whose nodes correspond to entities and edges to relationships. Previous attempts either…

人工智能 · 计算机科学 2015-06-03 Alberto Garcia-Duran , Antoine Bordes , Nicolas Usunier , Yves Grandvalet

Knowledge Graph Completion is a task of expanding the knowledge graph/base through estimating possible entities, or proper nouns, that can be connected using a set of predefined relations, or verb/predicates describing interconnections of…

计算与语言 · 计算机科学 2021-01-25 Tong Chen , Sirou Zhu , Yiming Wen , Zhaomin Zheng

A pharmacological effect of a drug on cells, organs and systems refers to the specific biochemical interaction produced by a drug substance, which is called its mechanism of action. Drug repositioning (or drug repurposing) is a fundamental…

机器学习 · 计算机科学 2020-05-19 Dehua Chen , Amir Jalilifard , Adriano Veloso , Nivio Ziviani

As science advances, the academic community has published millions of research papers. Researchers devote time and effort to search relevant manuscripts when writing a paper or simply to keep up with current research. In this paper, we…

信息检索 · 计算机科学 2018-12-11 Haofeng Jia , Erik Saule