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Most state-of-the-art models in natural language processing (NLP) are neural models built on top of large, pre-trained, contextual language models that generate representations of words in context and are fine-tuned for the task at hand.…

计算与语言 · 计算机科学 2020-10-13 Brian Lester , Daniel Pressel , Amy Hemmeter , Sagnik Ray Choudhury , Srinivas Bangalore

The medical domain is vast and diverse, with many existing embedding models focused on general healthcare applications. However, these models often struggle to capture a deep understanding of diseases due to their broad generalization…

计算与语言 · 计算机科学 2024-12-23 Salman Faroz

Recently, the performance of Pre-trained Language Models (PLMs) has been significantly improved by injecting knowledge facts to enhance their abilities of language understanding. For medical domains, the background knowledge sources are…

计算与语言 · 计算机科学 2021-08-23 Taolin Zhang , Zerui Cai , Chengyu Wang , Minghui Qiu , Bite Yang , Xiaofeng He

Low-dimensional embeddings of knowledge graphs and behavior graphs have proved remarkably powerful in varieties of tasks, from predicting unobserved edges between entities to content recommendation. The two types of graphs can contain…

机器学习 · 计算机科学 2019-08-29 Yuting Ye , Xuwu Wang , Jiangchao Yao , Kunyang Jia , Jingren Zhou , Yanghua Xiao , Hongxia Yang

Embeddings of medical concepts such as medication, procedure and diagnosis codes in Electronic Medical Records (EMRs) are central to healthcare analytics. Previous work on medical concept embedding takes medical concepts and EMRs as words…

计算与语言 · 计算机科学 2018-06-11 Xiangrui Cai , Jinyang Gao , Kee Yuan Ngiam , Beng Chin Ooi , Ying Zhang , Xiaojie Yuan

This study proposes a medical entity extraction method based on Transformer to enhance the information extraction capability of medical literature. Considering the professionalism and complexity of medical texts, we compare the performance…

计算与语言 · 计算机科学 2025-04-08 Xiaokai Wang , Guiran Liu , Binrong Zhu , Jacky He , Hongye Zheng , Hanlu Zhang

Deep learning models exhibit state-of-the-art performance for many predictive healthcare tasks using electronic health records (EHR) data, but these models typically require training data volume that exceeds the capacity of most healthcare…

机器学习 · 计算机科学 2018-10-24 Edward Choi , Cao Xiao , Walter F. Stewart , Jimeng Sun

This research on data extraction methods applies recent advances in natural language processing to evidence synthesis based on medical texts. Texts of interest include abstracts of clinical trials in English and in multilingual contexts.…

计算与语言 · 计算机科学 2020-01-31 Lena Schmidt , Julie Weeds , Julian P. T. Higgins

Large language models (LLMs) have been widely explored for embedding generation. While recent studies show that in-context learning (ICL) effectively enhances the representational capability of LLMs by prepending a few task-related…

计算与语言 · 计算机科学 2026-05-05 Ailiang Lin , Zhuoyun Li , Keyu Mao , Kotaro Funakoshi , Manabu Okumura

We present BEEP (Biomedical Evidence-Enhanced Predictions), a novel approach for clinical outcome prediction that retrieves patient-specific medical literature and incorporates it into predictive models. Based on each individual patient's…

计算与语言 · 计算机科学 2022-11-17 Aakanksha Naik , Sravanthi Parasa , Sergey Feldman , Lucy Lu Wang , Tom Hope

We propose a selective learning method using meta-learning and deep reinforcement learning for medical image interpretation in the setting of limited labeling resources. Our method, MedSelect, consists of a trainable deep learning selector…

计算机视觉与模式识别 · 计算机科学 2021-03-29 Akshay Smit , Damir Vrabac , Yujie He , Andrew Y. Ng , Andrew L. Beam , Pranav Rajpurkar

Term clustering is important in biomedical knowledge graph construction. Using similarities between terms embedding is helpful for term clustering. State-of-the-art term embeddings leverage pretrained language models to encode terms, and…

计算与语言 · 计算机科学 2022-04-04 Sihang Zeng , Zheng Yuan , Sheng Yu

We tackle the problem of identifying metaphors in text, treated as a sequence tagging task. The pre-trained word embeddings GloVe, ELMo and BERT have individually shown good performance on sequential metaphor identification. These…

计算与语言 · 计算机科学 2021-04-08 Rui Mao , Chenghua Lin , Frank Guerin

With an increase of dataset availability, the potential for learning from a variety of data sources has increased. One particular method to improve learning from multiple data sources is to embed the data source during training. This allows…

计算与语言 · 计算机科学 2021-12-08 Rob van der Goot , Miryam de Lhoneux

The recognition of pharmacological substances, compounds and proteins is an essential preliminary work for the recognition of relations between chemicals and other biomedically relevant units. In this paper, we describe an approach to Task…

计算与语言 · 计算机科学 2019-10-09 Manuel Stoeckel , Wahed Hemati , Alexander Mehler

Exploring the predictive capabilities of language models in material science is an ongoing interest. This study investigates the application of language model embeddings to enhance material property prediction in materials science. By…

计算与语言 · 计算机科学 2024-11-05 Yuwei Wan , Tong Xie , Nan Wu , Wenjie Zhang , Chunyu Kit , Bram Hoex

Current methods for multimodal medical imaging based disease recognition face two major challenges. First, the prevailing "fusion after unimodal image embedding" paradigm cannot fully leverage the complementary and correlated information in…

计算机视觉与模式识别 · 计算机科学 2026-04-07 Qijie Wei , Hailan Lin , Xirong Li

Understanding patient feedback is crucial for improving healthcare services, yet analyzing unlabeled short-text feedback presents challenges due to limited data and domain-specific nuances. Traditional supervised approaches require…

机器学习 · 计算机科学 2026-01-21 K M Sajjadul Islam , Ravi Teja Karri , Srujan Vegesna , Jiawei Wu , Praveen Madiraju

Element segmentation is a key step in nondestructive testing of Printed Circuit Boards (PCB) based on Computed Tomography (CT) technology. In recent years, the rapid development of self-supervised pretraining technology can obtain general…

计算机视觉与模式识别 · 计算机科学 2024-05-10 Chen Chen , Kai Qiao , Jie Yang , Jian Chen , Bin Yan

3D image segmentation plays an important role in biomedical image analysis. Many 2D and 3D deep learning models have achieved state-of-the-art segmentation performance on 3D biomedical image datasets. Yet, 2D and 3D models have their own…

计算机视觉与模式识别 · 计算机科学 2018-12-11 Hao Zheng , Yizhe Zhang , Lin Yang , Peixian Liang , Zhuo Zhao , Chaoli Wang , Danny Z. Chen