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Network embedding has numerous practical applications and has received extensive attention in graph learning, which aims at mapping vertices into a low-dimensional and continuous dense vector space by preserving the underlying structural…

机器学习 · 计算机科学 2024-08-07 Longlong Lin , Yunfeng Yu , Zihao Wang , Zeli Wang , Yuying Zhao , Jin Zhao , Tao Jia

Due to the sequential sample arrival, changing experiment conditions, and evolution of knowledge, the demand to continually visualize evolving structures of sequential and diverse single-cell RNA-sequencing (scRNA-seq) data becomes…

基因组学 · 定量生物学 2024-06-24 Hui Ma , Kai Chen

We explore the use of graph neural networks (GNNs) to model spatial processes in which there is no a priori graphical structure. Similar to finite element analysis, we assign nodes of a GNN to spatial locations and use a computational…

Graph embedding methods aim at finding useful graph representations by mapping nodes to a low-dimensional vector space. It is a task with important downstream applications, such as link prediction, graph reconstruction, data visualization,…

机器学习 · 计算机科学 2022-09-13 Said Kerrache , Hafida Benhidour

t-SNE is a popular tool for embedding multi-dimensional datasets into two or three dimensions. However, it has a large computational cost, especially when the input data has many dimensions. Many use t-SNE to embed the output of a neural…

机器学习 · 计算机科学 2019-12-04 Rikhav Shah , Sandeep Silwal

This paper describes a new method for representing embedding tables of graph neural networks (GNNs) more compactly via tensor-train (TT) decomposition. We consider the scenario where (a) the graph data that lack node features, thereby…

机器学习 · 计算机科学 2022-06-22 Chunxing Yin , Da Zheng , Israt Nisa , Christos Faloutos , George Karypis , Richard Vuduc

Multimodal relational data analysis has become of increasing importance in recent years, for exploring across different domains of data, such as images and their text tags obtained from social networking services (e.g., Flickr). A variety…

机器学习 · 计算机科学 2020-05-05 Morihiro Mizutani , Akifumi Okuno , Geewook Kim , Hidetoshi Shimodaira

Graph Neural Networks (GNNs) are de facto solutions to structural data learning. However, it is susceptible to low-quality and unreliable structure, which has been a norm rather than an exception in real-world graphs. Existing graph…

机器学习 · 计算机科学 2023-03-20 Dongcheng Zou , Hao Peng , Xiang Huang , Renyu Yang , Jianxin Li , Jia Wu , Chunyang Liu , Philip S. Yu

This paper proposes a scalable algorithmic framework for spectral reduction of large undirected graphs. The proposed method allows computing much smaller graphs while preserving the key spectral (structural) properties of the original…

数据结构与算法 · 计算机科学 2018-12-24 Zhiqiang Zhao , Yongyu Wang , Zhuo Feng

Graph Visualization, also known as Graph Drawing, aims to find geometric embeddings of graphs that optimize certain criteria. Stress is a widely used metric; stress is minimized when every pair of nodes is positioned at their shortest path…

计算几何 · 计算机科学 2024-02-13 Florian Grötschla , Joël Mathys , Robert Veres , Roger Wattenhofer

We present S+t-SNE, an adaptation of the t-SNE algorithm designed to handle infinite data streams. The core idea behind S+t-SNE is to update the t-SNE embedding incrementally as new data arrives, ensuring scalability and adaptability to…

人工智能 · 计算机科学 2025-01-22 Pedro C. Vieira , João P. Montrezol , João T. Vieira , João Gama

Despite being very successful within the pattern recognition and machine learning community, graph-based methods are often unusable because of the lack of mathematical operations defined in graph domain. Graph embedding, which maps graphs…

计算机视觉与模式识别 · 计算机科学 2020-01-07 Anjan Dutta , Pau Riba , Josep Lladós , Alicia Fornés

Graph embedding has been proven to be efficient and effective in facilitating graph analysis. In this paper, we present a novel spectral framework called NOn-Backtracking Embedding (NOBE), which offers a new perspective that organizes graph…

社会与信息网络 · 计算机科学 2018-01-19 Fei Jiang , Lifang He , Yi Zheng , Enqiang Zhu , Jin Xu , Philip S. Yu

Dimensionality reduction is crucial both for visualization and preprocessing high dimensional data for machine learning. We introduce a novel method based on a hierarchy built on 1-nearest neighbor graphs in the original space which is used…

计算机视觉与模式识别 · 计算机科学 2022-05-31 M. Saquib Sarfraz , Marios Koulakis , Constantin Seibold , Rainer Stiefelhagen

Relational data mining is becoming ubiquitous in many fields of study. It offers insights into behaviour of complex, real-world systems which cannot be modeled directly using propositional learning. We propose Symbolic Graph Embedding…

机器学习 · 计算机科学 2019-10-30 Blaz Škrlj , Jan Kralj , Nada Lavrač

Camera relocalization is the key component of simultaneous localization and mapping (SLAM) systems. This paper proposes a learning-based approach, named Sparse Spatial Scene Embedding with Graph Neural Networks (S3E-GNN), as an end-to-end…

计算机视觉与模式识别 · 计算机科学 2022-05-13 Ran Cheng , Xinyu Jiang , Yuan Chen , Lige Liu , Tao Sun

We propose LIGHTNE 2.0, a cost-effective, scalable, automated, and high-quality network embedding system that scales to graphs with hundreds of billions of edges on a single machine. In contrast to the mainstream belief that distributed…

社会与信息网络 · 计算机科学 2023-02-15 Yuyang Xie , Jiezhong Qiu , Laxman Dhulipala , Wenjian Yu , Jie Tang , Richard Peng , Chi Wang

Neighbour embeddings (NE) allow the representation of high dimensional datasets into lower dimensional spaces and are often used in data visualisation. In practice, accelerated approximations are employed to handle very large datasets.…

机器学习 · 计算机科学 2025-09-10 Pierre Lambert , Edouard Couplet , Michel Verleysen , John Aldo Lee

Recent deep learning models have moved beyond low-dimensional regular grids such as image, video, and speech, to high-dimensional graph-structured data, such as social networks, brain connections, and knowledge graphs. This evolution has…

分布式、并行与集群计算 · 计算机科学 2018-10-22 Lingxiao Ma , Zhi Yang , Youshan Miao , Jilong Xue , Ming Wu , Lidong Zhou , Yafei Dai

We introduce the Graph Sylvester Embedding (GSE), an unsupervised graph representation of local similarity, connectivity, and global structure. GSE uses the solution of the Sylvester equation to capture both network structure and…

机器学习 · 计算机科学 2022-05-10 Shay Deutsch , Stefano Soatto