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相关论文: Adversarial Learned Molecular Graph Inference and …

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Our main motivation is to propose an efficient approach to generate novel multi-element stable chemical compounds that can be used in real world applications. This task can be formulated as a combinatorial problem, and it takes many hours…

机器学习 · 计算机科学 2019-05-28 Asma Nouira , Nataliya Sokolovska , Jean-Claude Crivello

Existing drug discovery pipelines take 5-10 years and cost billions of dollars. Computational approaches aim to sample from regions of the whole molecular and solid-state compounds called chemical space which could be on the order of 1060 .…

新兴技术 · 计算机科学 2021-01-12 Junde Li , Rasit Topaloglu , Swaroop Ghosh

Large-scale knowledge graphs (KGs) are shown to become more important in current information systems. To expand the coverage of KGs, previous studies on knowledge graph completion need to collect adequate training instances for newly-added…

计算与语言 · 计算机科学 2020-01-09 Pengda Qin , Xin Wang , Wenhu Chen , Chunyun Zhang , Weiran Xu , William Yang Wang

Generating realistic graph-structured data is challenging due to discrete structures, variable sizes, and class-specific connectivity patterns that resist conventional generative modelling. While recent graph generation methods employ…

机器学习 · 计算机科学 2026-02-02 Seyedeh Ava Razi Razavi , James Sargant , Sheridan Houghten , Renata Dividino

We present Adaptive Multi-layer Contrastive Graph Neural Networks (AMC-GNN), a self-supervised learning framework for Graph Neural Network, which learns feature representations of sample data without data labels. AMC-GNN generates two graph…

机器学习 · 计算机科学 2023-11-30 Shuhao Shi , Pengfei Xie , Xu Luo , Kai Qiao , Linyuan Wang , Jian Chen , Bin Yan

Graph generation has emerged as a crucial task in machine learning, with significant challenges in generating graphs that accurately reflect specific properties. Existing methods often fall short in efficiently addressing this need as they…

Contrastive learning is an effective unsupervised method in graph representation learning. Recently, the data augmentation based contrastive learning method has been extended from images to graphs. However, most prior works are directly…

机器学习 · 计算机科学 2023-12-19 Shengyu Feng , Baoyu Jing , Yada Zhu , Hanghang Tong

Adversarial learning of probabilistic models has recently emerged as a promising alternative to maximum likelihood. Implicit models such as generative adversarial networks (GAN) often generate better samples compared to explicit models…

机器学习 · 计算机科学 2018-01-08 Aditya Grover , Manik Dhar , Stefano Ermon

It is common practice for chemists to search chemical databases based on substructures of compounds for finding molecules with desired properties. The purpose of de novo molecular generation is to generate instead of search. Existing…

化学物理 · 物理学 2021-02-10 Ryuichiro Hataya , Hideki Nakayama , Kazuki Yoshizoe

We propose a simple algorithm to train stochastic neural networks to draw samples from given target distributions for probabilistic inference. Our method is based on iteratively adjusting the neural network parameters so that the output…

机器学习 · 统计学 2016-11-29 Dilin Wang , Qiang Liu

We consider the problem of modelling high-dimensional distributions and generating new examples of data with complex relational feature structure coherent with a graph skeleton. The model we propose tackles the problem of generating the…

机器学习 · 计算机科学 2022-12-02 Yoann Boget , Magda Gregorova , Alexandros Kalousis

Adversarial examples in machine learning are typically generated using gradients, obtained either directly through access to the model or approximated via queries to it. In this paper, we propose a much simpler approach to craft adversarial…

机器学习 · 计算机科学 2026-05-05 Alexander Warnecke , Konrad Rieck

Properties of molecules are indicative of their functions and thus are useful in many applications. With the advances of deep learning methods, computational approaches for predicting molecular properties are gaining increasing momentum.…

定量方法 · 定量生物学 2021-07-07 Zhengyang Wang , Meng Liu , Youzhi Luo , Zhao Xu , Yaochen Xie , Limei Wang , Lei Cai , Qi Qi , Zhuoning Yuan , Tianbao Yang , Shuiwang Ji

We propose a higher-level associative memory for learning adversarial networks. Generative adversarial network (GAN) framework has a discriminator and a generator network. The generator (G) maps white noise (z) to data samples while the…

机器学习 · 计算机科学 2016-11-23 Tarik Arici , Asli Celikyilmaz

Recently, the surge in popularity of Internet of Things (IoT), mobile devices, social media, etc. has opened up a large source for graph data. Graph embedding has been proved extremely useful to learn low-dimensional feature representations…

机器学习 · 计算机科学 2020-09-01 Kaiyang Li , Guangchun Luo , Yang Ye , Wei Li , Shihao Ji , Zhipeng Cai

Adversarial learning represents a powerful technique for generating data statistics. Its successful implementation in quantum computational platforms is not straightforward due to limitations in connectivity, quantum operation fidelity, and…

量子物理 · 物理学 2022-09-07 Sandra Nguemto , Vicente Leyton-Ortega

Most of the existing generative adversarial networks (GAN) for text generation suffer from the instability of reinforcement learning training algorithms such as policy gradient, leading to unstable performance. To tackle this problem, we…

计算与语言 · 计算机科学 2019-08-21 Pei Ke , Fei Huang , Minlie Huang , Xiaoyan Zhu

We study the problem of 3D object generation. We propose a novel framework, namely 3D Generative Adversarial Network (3D-GAN), which generates 3D objects from a probabilistic space by leveraging recent advances in volumetric convolutional…

计算机视觉与模式识别 · 计算机科学 2017-01-05 Jiajun Wu , Chengkai Zhang , Tianfan Xue , William T. Freeman , Joshua B. Tenenbaum

We study a fundamental problem in computational chemistry known as molecular conformation generation, trying to predict stable 3D structures from 2D molecular graphs. Existing machine learning approaches usually first predict distances…

机器学习 · 计算机科学 2021-06-09 Chence Shi , Shitong Luo , Minkai Xu , Jian Tang

Graph neural networks (GNNs) have emerged as powerful tools to accurately predict materials and molecular properties in computational discovery pipelines. In this article, we exploit the invertible nature of these neural networks to…

机器学习 · 计算机科学 2024-06-06 Félix Therrien , Edward H. Sargent , Oleksandr Voznyy