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Polyp segmentation is a critical step in colorectal cancer detection, yet it remains challenging due to the diverse shapes, sizes, and low contrast boundaries of polyps in medical imaging. In this work, we propose a novel framework that…

计算机视觉与模式识别 · 计算机科学 2025-09-30 Fatemeh Salahi Chashmi , Roya Sotoudeh

Cancer segmentation in whole-slide images is a fundamental step for viable tumour burden estimation, which is of great value for cancer assessment. However, factors like vague boundaries or small regions dissociated from viable tumour areas…

图像与视频处理 · 电气工程与系统科学 2021-09-28 Yibao Sun , Giussepi Lopez , Yaqi Wang , Xingru Huang , Huiyu Zhou , Qianni Zhang

Triple-negative breast cancer (TNBC) remains a major clinical challenge due to its aggressive behavior and lack of targeted therapies. Accurate early prediction of response to neoadjuvant chemotherapy (NACT) is essential for guiding…

定量方法 · 定量生物学 2025-07-29 Hikmat Khan , Ziyu Su , Huina Zhang , Yihong Wang , Bohan Ning , Shi Wei , Hua Guo , Zaibo Li , Muhammad Khalid Khan Niazi

Chemical databases store information in text representations, and the SMILES format is a universal standard used in many cheminformatics software. Encoded in each SMILES string is structural information that can be used to predict complex…

机器学习 · 统计学 2018-08-16 Garrett B. Goh , Nathan O. Hodas , Charles Siegel , Abhinav Vishnu

Molecular subtyping of breast cancer is crucial for personalized treatment and prognosis. Traditional classification approaches rely on either histopathological images or gene expression profiling, limiting their predictive power. In this…

计算机视觉与模式识别 · 计算机科学 2025-03-05 Amin Honarmandi Shandiz

Artificial Intelligence predicts drug properties by encoding drug molecules, aiding in the rapid screening of candidates. Different molecular representations, such as SMILES and molecule graphs, contain complementary information for…

机器学习 · 计算机科学 2024-06-27 Muzhen Cai , Sendong Zhao , Haochun Wang , Yanrui Du , Zewen Qiang , Bing Qin , Ting Liu

Cancer claims millions of lives yearly worldwide. While many therapies have been made available in recent years, by in large cancer remains unsolved. Exploiting computational predictive models to study and treat cancer holds great promise…

Speech emotion recognition is a challenging task for three main reasons: 1) human emotion is abstract, which means it is hard to distinguish; 2) in general, human emotion can only be detected in some specific moments during a long…

声音 · 计算机科学 2019-05-03 Yuanyuan Zhang , Jun Du , Zirui Wang , Jianshu Zhang

Multimodal pathology-genomic analysis has become increasingly prominent in cancer survival prediction. However, existing studies mainly utilize multi-instance learning to aggregate patch-level features, neglecting the information loss of…

计算机视觉与模式识别 · 计算机科学 2025-05-21 Mingcheng Qu , Guang Yang , Donglin Di , Tonghua Su , Yue Gao , Yang Song , Lei Fan

We introduce IntFold, a controllable foundation model for general and specialized biomolecular structure prediction. Utilizing a high-performance custom attention kernel, IntFold achieves accuracy comparable to the state-of-the-art…

生物大分子 · 定量生物学 2025-07-08 The IntFold Team , Leon Qiao , Wayne Bai , He Yan , Gary Liu , Nova Xi , Xiang Zhang , Siqi Sun

A precise assessment of the risk of breast lesions can greatly lower it and assist physicians in choosing the best course of action. To categorise breast lesions, the majority of current computer-aided systems only use characteristics from…

图像与视频处理 · 电气工程与系统科学 2025-08-25 Muhaisin Tiyumba Nantogmah , Abdul-Barik Alhassan , Salamudeen Alhassan

Deep learning has become the mainstream methodological choice for analyzing and interpreting whole-slide digital pathology images (WSIs). It is commonly assumed that tumor regions carry most predictive information. In this paper, we…

定量方法 · 定量生物学 2022-04-26 Zihan Chen , Xingyu Li , Miaomiao Yang , Hong Zhang , Xu Steven Xu

Non-muscle-invasive bladder cancer (NMIBC) is a relentless challenge in oncology, with recurrence rates soaring as high as 70-80%. Each recurrence triggers a cascade of invasive procedures, lifelong surveillance, and escalating healthcare…

机器学习 · 计算机科学 2025-05-02 Saram Abbas , Naeem Soomro , Rishad Shafik , Rakesh Heer , Kabita Adhikari

Machine learning and deep learning have gained popularity and achieved immense success in Drug discovery in recent decades. Historically, machine learning and deep learning models were trained on either structural data or chemical…

机器学习 · 统计学 2019-09-18 Huy Ngoc Pham , Trung Hoang Le

Transformer self-attention computes pairwise token interactions, yet protein sequence to phenotype relationships often involve cooperative dependencies among three or more residues that dot product attention does not capture explicitly. We…

机器学习 · 计算机科学 2026-03-13 Shirin Amiraslani , Xin Gao

Machine learning (ML) offers considerable promise for the design of new molecules and materials. In real-world applications, the design problem is often domain-specific, and suffers from insufficient data, particularly labeled data, for ML…

化学物理 · 物理学 2025-02-04 Ming Han , Ge Sun , Juan J. de Pablo

Breast cancer(BC) is a prevalent type of malignant tumor in women. Early diagnosis and treatment are vital for enhancing the patients' survival rate. Downsampling in deep networks may lead to loss of information, so for compensating the…

计算机视觉与模式识别 · 计算机科学 2024-01-05 Bo Yang , Hong Peng , Xiaohui Luo , Jun Wang

Cancer genomes exhibit a large number of different alterations that affect many genes in a diverse manner. It is widely believed that these alterations follow combinatorial patterns that have a strong connection with the underlying…

机器学习 · 计算机科学 2016-01-26 Jack P. Hou , Amin Emad , Gregory J. Puleo , Jian Ma , Olgica Milenkovic

Multimodal deep learning for cancer prognosis is commonly assumed to benefit from synergistic cross-modal interactions, yet this assumption has not been directly tested in survival prediction settings. This work adapts InterSHAP, a Shapley…

机器学习 · 计算机科学 2026-04-15 Iain Swift , JingHua Ye , Ruairi O'Reilly

As the application of deep learning in dermatology continues to grow, the recognition of melanoma has garnered significant attention, demonstrating potential for improving diagnostic accuracy. Despite advancements in image classification…

计算机视觉与模式识别 · 计算机科学 2026-05-11 Rujosh Polma , Krishnan Menon Iyer