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The motion of active polymers in a porous medium is shown to depend critically on flexibilty, activity and degree of polymerization. For given Peclet number, we observe a transition from localisation to diffusion as the stiffness of the…

软凝聚态物质 · 物理学 2019-07-17 Zahra Mokhtari , Annette Zippelius

Certain bacteria form filamentous colonies when the cells fail to separate after dividing. In Bacillus subtilis, Bacillus thermus, and cyanobacteria, the filaments can wrap into complex supercoiled structures as the cells grow. The…

软凝聚态物质 · 物理学 2010-05-26 Charles W. Wolgemuth , Raymond E. Goldstein , Thomas R. Powers

We use molecular dynamics simulations to study the dynamics of Janus particles, micro- or nanoparticles which are not spherically symmetric, in the uniform flow of a simple liquid. In particular we consider spheres with an asymmetry in the…

流体动力学 · 物理学 2016-06-10 Aurelien Y. M. Archereau , Shaun C. Hendy , Geoff. R. Willmott

Active materials take advantage of their internal sources of energy to self-organize in an automated manner. This feature provides a novel opportunity to design micron-scale machines with minimal required control. However, self-organization…

软凝聚态物质 · 物理学 2021-01-22 Zijie Qu , Jialong Jiang , Heun Jin Lee , Rob Phillips , Shahriar Shadkhoo , Matt Thomson

Particle sedimentation through porous media is limited by the inability of passive material to overcome surface interactions and a tortuous network of pores. This limits transport, delivery, and effectiveness of chemicals used as reactants,…

软凝聚态物质 · 物理学 2024-07-26 Samuel R. Wilson-Whitford , David Kramer , Jinghui Gao , Maria Chiara Roffin , James F. Gilchrist

Movements of molecular motors on cytoskeletal filaments are described by directed walks on a line. Detachment from this line is allowed to occur with a small probability. Motion in the surrounding fluid is described by symmetric random…

统计力学 · 物理学 2007-05-23 Theo M. Nieuwenhuizen , Stefan Klumpp , Reinhard Lipowsky

Motivated to understand the behavior of biological filaments interacting with membranes of various types, we study a theoretical model for the shape and thermodynamics of intrinsically-helical filaments bound to curved membranes. We show…

软凝聚态物质 · 物理学 2016-11-03 D. A. Quint , A. Gopinathan , G. M. Grason

Active gels are a class of biologically-relevant material containing embedded agents that spontaneously generate forces acting on a sparse filament network. In vitro experiments of protein filaments and molecular motors have revealed a…

软凝聚态物质 · 物理学 2024-06-03 David A. Head , Gerhard Gompper , W. J. Briels

A salient feature of topological phases are surface states and many of the widely studied physical properties are directly tied to their existence. Although less explored, a variety of topological phases can however similarly be…

介观与纳米尺度物理 · 物理学 2021-08-11 Toshikaze Kariyado , Robert-Jan Slager

Transport properties of particles in confining geometries show very specific characteristics as lateral drift, oscillatory movement between lateral walls or the deformation of flexible fibers. These dynamics result from viscous friction…

流体动力学 · 物理学 2020-04-03 M. Bechert , J. Cappello , M. Daïeff , F. Gallaire , A. Lindner , C. Duprat

We create mechanical metamaterials whose response to uniaxial compression can be programmed by lateral confinement, allowing monotonic, non-monotonic and hysteretic behavior. These functionalities arise from a broken rotational symmetry…

软凝聚态物质 · 物理学 2015-06-22 Bastiaan Florijn , Corentin Coulais , Martin van Hecke

Active filaments are a workhorse for propulsion and actuation across biology, soft robotics and mechanical metamaterials. However, artificial active rods suffer from limited robustness and adaptivity because they rely on external control,…

Colloidal Janus spheres in water (one hemisphere attractive and the other repulsive) assemble into two-dimensional hexagonal crystals with orientational order controlled by anisotropic interactions. We exploit the decoupled translational…

软凝聚态物质 · 物理学 2014-06-11 Shan Jiang , Jing Yan , Jonathan K. Whitmer , Stephen M. Anthony , Erik Luijten , Steve Granick

We present a general theoretical analysis of semiflexible filaments subject to viscous drag or point forcing. These are the relevant forces in dynamic experiments designed to measure biopolymer bending moduli. By analogy with the ``Stokes…

软凝聚态物质 · 物理学 2009-10-30 Chris H. Wiggins , Daniel X. Riveline , Albrecht Ott , Raymond E. Goldstein

We investigate active particles that exhibit long-range interactions only restricted by a field of view, which is characterized by an angle $\beta$. We show that constraining attractive interactions to a field of view leads to the emergence…

生物物理 · 物理学 2026-04-03 Edgardo Brigatti , Fernando Peruani

Systems driven far from equilibrium may exhibit anomalous density fluctuations: active matter with orientational order display giant density fluctuations at large scale, while systems of interacting particles close to an absorbing phase…

统计力学 · 物理学 2026-03-23 Sara Dal Cengio , Romain Mari , Eric Bertin

Initially straight slender elastic rods with geometrically constrained ends buckle and form stable two-dimensional shapes when compressed by bringing the ends together. It is also known that beyond a critical value of the pre-stress,…

斑图形成与孤子 · 物理学 2021-02-03 Soheil Fatehiboroujeni , Arvind Gopinath , Sachin Goyal

Flexible ferromagnetic rings are spin-chain magnets, in which the magnetic and mechanical subsystems are coupled. The coupling is achieved through the tangentially oriented anisotropy axis. The possibility to operate the mechanics of the…

介观与纳米尺度物理 · 物理学 2019-01-09 Yuri Gaididei , Kostiantyn V. Yershov , Denis D. Sheka , Volodymyr P. Kravchuk , Avadh Saxena

The kinetics of the assembly of semiflexible filaments through end-to-end annealing is key to the structure of the cytoskeleton, but is not understood. We analyze this problem through scaling theory and simulations, and uncover a regime…

软凝聚态物质 · 物理学 2023-12-18 Valerio Sorichetti , Martin Lenz

We consider a mixture of one neutral and two oppositely charged types of molecules confined to a surface. Using analytical techniques and molecular dynamics simulations, we construct the phase diagram of the system and exhibit the…

软凝聚态物质 · 物理学 2009-11-11 Sharon M. Loverde , Francisco Solis , Monica Olvera de la Cruz