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We examine two fundamental tasks associated with graph representation learning: link prediction and semi-supervised node classification. We present a novel autoencoder architecture capable of learning a joint representation of both local…

机器学习 · 计算机科学 2019-03-12 Phi Vu Tran

The autoencoder is an effective unsupervised learning model which is widely used in deep learning. It is well known that an autoencoder with a single fully-connected hidden layer, a linear activation function and a squared error cost…

机器学习 · 统计学 2019-01-01 Elad Plaut

It is increasingly common clinically for cancer specimens to be examined using techniques that identify somatic mutations. In principle these mutational profiles can be used to diagnose the tissue of origin, a critical task for the 3-5% of…

统计方法学 · 统计学 2020-07-14 Saptarshi Chakraborty , Colin B. Begg , Ronglai Shen

Recurrent models for sequences have been recently successful at many tasks, especially for language modeling and machine translation. Nevertheless, it remains challenging to extract good representations from these models. For instance, even…

机器学习 · 计算机科学 2018-01-31 Łukasz Kaiser , Samy Bengio

Despite the advances in medicine, cancer has remained a formidable challenge. Particularly in the case of pancreatic tumors, characterized by their diversity and late diagnosis, early detection poses a significant challenge crucial for…

图像与视频处理 · 电气工程与系统科学 2024-06-06 Reza Babaei , Samuel Cheng , Theresa Thai , Shangqing Zhao

Gene expression profiles obtained through DNA microarray have proven successful in providing critical information for cancer detection classifiers. However, the limited number of samples in these datasets poses a challenge to employ complex…

机器学习 · 计算机科学 2024-08-20 Arya Hadizadeh Moghaddam , Mohsen Nayebi Kerdabadi , Cuncong Zhong , Zijun Yao

Most of the current state-of-the-art methods for tumor segmentation are based on machine learning models trained on manually segmented images. This type of training data is particularly costly, as manual delineation of tumors is not only…

计算机视觉与模式识别 · 计算机科学 2019-08-21 Pawel Mlynarski , Hervé Delingette , Antonio Criminisi , Nicholas Ayache

Supervised learning is based on the assumption that the ground truth in the training data is accurate. However, this may not be guaranteed in real-world settings. Inaccurate training data will result in some unexpected predictions. In image…

计算机视觉与模式识别 · 计算机科学 2022-01-06 Yunhao Yang , Andrew Whinston

Autoencoders are among the earliest introduced nonlinear models for unsupervised learning. Although they are widely adopted beyond research, it has been a longstanding open problem to understand mathematically the feature extraction…

机器学习 · 计算机科学 2021-02-17 Phan-Minh Nguyen

There exists unexplained diverse variation within the predefined colon cancer stages using only features either from genomics or histopathological whole slide images as prognostic factors. Unraveling this variation will bring about improved…

定量方法 · 定量生物学 2022-12-15 Olalekan Ogundipe , Zeyneb Kurt , Wai Lok Woo

Inferring biological relationships from cellular phenotypes in high-content microscopy screens provides significant opportunity and challenge in biological research. Prior results have shown that deep vision models can capture biological…

One of the most challenges in medical imaging is the lack of data and annotated data. It is proven that classical segmentation methods such as U-NET are useful but still limited due to the lack of annotated data. Using a weakly supervised…

图像与视频处理 · 电气工程与系统科学 2020-03-20 Amine Amyar , Romain Modzelewski , Pierre Vera , Vincent Morard , Su Ruan

Cancer is a complex disease, the understanding and treatment of which are being aided through increases in the volume of collected data and in the scale of deployed computing power. Consequently, there is a growing need for the development…

Semantic segmentation consists in classifying each pixel of an image by assigning it to a specific label chosen from a set of all the available ones. During the last few years, a lot of attention shifted to this kind of task. Many computer…

计算机视觉与模式识别 · 计算机科学 2021-12-28 Loris Nanni , Daniela Cuza , Alessandra Lumini , Andrea Loreggia , Sheryl Brahnam

A network supporting deep unsupervised learning is presented. The network is an autoencoder with lateral shortcut connections from the encoder to decoder at each level of the hierarchy. The lateral shortcut connections allow the higher…

机器学习 · 统计学 2015-02-03 Harri Valpola

Sparse autoencoders (SAEs) have lately been used to uncover interpretable latent features in large language models. By projecting dense embeddings into a much higher-dimensional and sparse space, learned features become disentangled and…

机器学习 · 计算机科学 2025-07-30 Viktoria Schuster

Brain tumors pose a significant threat to human life, therefore it is very much necessary to detect them accurately in the early stages for better diagnosis and treatment. Brain tumors can be detected by the radiologist manually from the…

计算机视觉与模式识别 · 计算机科学 2025-12-09 Sayan Das , Arghadip Biswas

Precise breast cancer classification on histopathological images has the potential to greatly improve the diagnosis and patient outcome in oncology. The data imbalance problem largely stems from the inherent imbalance within medical image…

图像与视频处理 · 电气工程与系统科学 2024-11-28 Majid Behzadpour , Bengie L. Ortiz , Ebrahim Azizi , Kai Wu

Breast cancer is a common fatal disease for women. Early diagnosis and detection is necessary in order to improve the prognosis of breast cancer affected people. For predicting breast cancer, several automated systems are already developed…

图像与视频处理 · 电气工程与系统科学 2020-06-03 Subrato Bharati , Prajoy Podder , M. Rubaiyat Hossain Mondal

Deep learning-based computer-aided diagnosis has achieved unprecedented performance in breast cancer detection. However, most approaches are computationally intensive, which impedes their broader dissemination in real-world applications. In…

图像与视频处理 · 电气工程与系统科学 2022-01-14 Jiaqiao Shi , Aleksandar Vakanski , Min Xian , Jianrui Ding , Chunping Ning