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The automated analysis of microscopy images is a challenge in the context of single-cell tracking and quantification. This work has as goals the study of the performance of deep learning for segmenting microscopy images and the improvement…

定量方法 · 定量生物学 2022-10-05 André O. Françani

Recently, a growing interest has been seen in deep learning-based semantic segmentation. UNet, which is one of deep learning networks with an encoder-decoder architecture, is widely used in medical image segmentation. Combining multi-scale…

图像与视频处理 · 电气工程与系统科学 2020-04-21 Huimin Huang , Lanfen Lin , Ruofeng Tong , Hongjie Hu , Qiaowei Zhang , Yutaro Iwamoto , Xianhua Han , Yen-Wei Chen , Jian Wu

Deep learning applications are drastically progressing in seismic processing and interpretation tasks. However, the majority of approaches subsample data volumes and restrict model sizes to minimise computational requirements. Subsampling…

地球物理 · 物理学 2021-02-26 Claire Birnie , Haithem Jarraya , Fredrik Hansteen

Although deep neural networks have been a dominant method for many 2D vision tasks, it is still challenging to apply them to 3D tasks, such as medical image segmentation, due to the limited amount of annotated 3D data and limited…

计算机视觉与模式识别 · 计算机科学 2020-11-02 Yingwei Li , Zhuotun Zhu , Yuyin Zhou , Yingda Xia , Wei Shen , Elliot K. Fishman , Alan L. Yuille

Image compression is a critical tool in decreasing the cost of storage and improving the speed of transmission over the internet. While deep learning applications for natural images widely adopts the usage of lossy compression techniques,…

图像与视频处理 · 电气工程与系统科学 2024-09-26 Anvar Kurmukov , Bogdan Zavolovich , Aleksandra Dalechina , Vladislav Proskurov , Boris Shirokikh

Medical image segmentation has achieved remarkable advancements using deep neural networks (DNNs). However, DNNs often need big amounts of data and annotations for training, both of which can be difficult and costly to obtain. In this work,…

计算机视觉与模式识别 · 计算机科学 2021-10-19 Hengji Cui , Dong Wei , Kai Ma , Shi Gu , Yefeng Zheng

Convolutional Neural Networks (CNNs) have been recently employed to solve problems from both the computer vision and medical image analysis fields. Despite their popularity, most approaches are only able to process 2D images while most…

计算机视觉与模式识别 · 计算机科学 2016-06-16 Fausto Milletari , Nassir Navab , Seyed-Ahmad Ahmadi

Over the past decades, state-of-the-art medical image segmentation has heavily rested on signal processing paradigms, most notably registration-based label propagation and pair-wise patch comparison, which are generally slow despite a high…

计算机视觉与模式识别 · 计算机科学 2018-07-17 Zhongliu Xie , Duncan Gillies

Medical image segmentation has witnessed significant advancements with the emergence of deep learning. However, the reliance of most neural network models on a substantial amount of annotated data remains a challenge for medical image…

计算机视觉与模式识别 · 计算机科学 2024-07-30 Xiaoxiao Wu , Xiaowei Chen , Zhenguo Gao , Shulei Qu , Yuanyuan Qiu

Automated brain tumour segmentation has the potential of making a massive improvement in disease diagnosis, surgery, monitoring and surveillance. However, this task is extremely challenging. Here, we describe our automated segmentation…

图像与视频处理 · 电气工程与系统科学 2020-05-13 Indrajit Mazumdar

Detailed whole brain segmentation is an essential quantitative technique, which provides a non-invasive way of measuring brain regions from a structural magnetic resonance imaging (MRI). Recently, deep convolution neural network (CNN) has…

This paper presents a new regularization method to train a fully convolutional network for semantic tissue segmentation in histopathological images. This method relies on the benefit of unsupervised learning, in the form of image…

计算机视觉与模式识别 · 计算机科学 2020-11-26 C. T. Sari , C. Sokmensuer , C. Gunduz-Demir

Given the prevalence of 3D medical imaging technologies such as MRI and CT that are widely used in diagnosing and treating diverse diseases, 3D segmentation is one of the fundamental tasks of medical image analysis. Recently,…

计算机视觉与模式识别 · 计算机科学 2023-02-10 Yuhui Zhang , Shih-Cheng Huang , Zhengping Zhou , Matthew P. Lungren , Serena Yeung

Recent advancements in medical image segmentation techniques have achieved compelling results. However, most of the widely used approaches do not take into account any prior knowledge about the shape of the biomedical structures being…

图像与视频处理 · 电气工程与系统科学 2019-09-18 Zhou He , Siqi Bao , Albert Chung

Medical image segmentation relies heavily on large-scale deep learning models, such as UNet-based architectures. However, the real-world utility of such models is limited by their high computational requirements, which makes them…

计算机视觉与模式识别 · 计算机科学 2023-09-07 John Kalkhof , Anirban Mukhopadhyay

Neural network-based approaches can achieve high accuracy in various medical image segmentation tasks. However, they generally require large labelled datasets for supervised learning. Acquiring and manually labelling a large medical dataset…

图像与视频处理 · 电气工程与系统科学 2020-06-25 Chen Chen , Chen Qin , Huaqi Qiu , Cheng Ouyang , Shuo Wang , Liang Chen , Giacomo Tarroni , Wenjia Bai , Daniel Rueckert

Medical image segmentation has been so far achieving promising results with Convolutional Neural Networks (CNNs). However, it is arguable that in traditional CNNs, its pooling layer tends to discard important information such as positions.…

图像与视频处理 · 电气工程与系统科学 2022-04-12 Tan Nguyen , Binh-Son Hua , Ngan Le

Most medical image lesion segmentation methods rely on hand-crafted accurate annotations of the original image for supervised learning. Recently, a series of weakly supervised or unsupervised methods have been proposed to reduce the…

计算机视觉与模式识别 · 计算机科学 2024-06-24 Jiawei Chen , Dingkang Yang , Yuxuan Lei , Lihua Zhang

Purpose: To implement a brain segmentation pipeline based on convolutional neural networks, which rapidly segments 3D volumes into 27 anatomical structures. To provide an extensive, comparative study of segmentation performance on various…

图像与视频处理 · 电气工程与系统科学 2020-08-12 Jonathan Zopes , Moritz Platscher , Silvio Paganucci , Christian Federau

Recently, single-stage embedding based deep learning algorithms gain increasing attention in cell segmentation and tracking. Compared with the traditional "segment-then-associate" two-stage approach, a single-stage algorithm not only…

计算机视觉与模式识别 · 计算机科学 2021-04-21 Mengyang Zhao , Aadarsh Jha , Quan Liu , Bryan A. Millis , Anita Mahadevan-Jansen , Le Lu , Bennett A. Landman , Matthew J. Tyskac , Yuankai Huo