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A series of simulations aimed at elucidating the self-assembly dynamics of spherical virus capsids is described. This little-understood phenomenon is a fascinating example of the complex processes that occur in the simplest of organisms.…

软凝聚态物质 · 物理学 2015-05-19 D. C. Rapaport

Formation and rupture of vesicles is a fundamental process underlying diverse phenomena in biology, materials science, and biomedical applications. Vesicles form when the area of a growing disk-like membrane exceeds a critical value at…

软凝聚态物质 · 物理学 2025-11-11 Seungwoo Shin , Federico Cao , Robert A. Pelcovits , Thomas R. Powers , Zvonimir Dogic

Despite intense research, methods for controlling soft matter's spontaneous self-assembly in-to well-defined layers remain a significant challenge. We observed ion-induced structural disconti-nuities of phospholipid vesicles that can be…

软凝聚态物质 · 物理学 2024-04-01 Judith U. De Mel , Sudipta Gupta , Gerald J. Schneider

We develop a class of models with which we simulate the assembly of particles into T1 capsid-like objects using Newtonian dynamics. By simulating assembly for many different values of system parameters, we vary the forces that drive…

生物大分子 · 定量生物学 2009-11-11 Michael F. Hagan , David Chandler

We study a novel phase of active polar fluids, which is characterized by the continuous creation and destruction of dense clusters due to self-sustained turbulence. This state arises due to the interplay of the self-advection of the aligned…

软凝聚态物质 · 物理学 2022-07-12 Vasco M. Worlitzer , Gil Ariel , Avraham Be'er , Holger Stark , Markus Bär , Sebastian Heidenreich

Recent experiments have led to active colloidal molecules which aggregate from non-motile building blocks and acquire self-propulsion through their non-reciprocal interactions. Here, we model the collective behavior of such active molecules…

软凝聚态物质 · 物理学 2023-08-04 Sebastian Fehlinger , Benno Liebchen

The effect of crowding on the run-and-tumble dynamics of swimmers such as bacteria is studied using a discrete lattice model of mutually excluding particles that move with constant velocity along a direction that is randomized at a rate…

软凝聚态物质 · 物理学 2015-06-16 Rodrigo Soto , Ramin Golestanian

We study by simulation the physics of two colloidal particles in a cholesteric liquid crystal with tangential order parameter alignment at the particle surface. The effective force between the pair is attractive at short range and favors…

软凝聚态物质 · 物理学 2015-03-19 J. S. Lintuvuori , K. Stratford , M. E. Cates , D. Marenduzzo

The self-assembly of submerged cold-plasma-treated polyethylene beads is reported. The plasma-treated immersed millimetrically-sized polyethylene beads formed well-ordered 2D quasi-crystalline structures. The submerged floating of light…

In micro-swimmer suspensions locomotion necessarily generates fluid motion, and it is known that such flows can lead to collective behavior from unbiased swimming. We examine the complementary problem of how chemotaxis is affected by…

生物物理 · 物理学 2012-10-23 Enkeleida Lushi , Raymond E. Goldstein , Michael J. Shelley

The persistent character of the motion of active particles gives rise to accumulation at boundaries. I investigate the problem of run-and-tumble swimmers confined in a 1D box with hard walls, reporting expressions for the particles…

统计力学 · 物理学 2022-06-08 Luca Angelani

Microswimmers in suspension exhibit collective swimming behaviour, forming various self-organised structures including ordered, aggregated, and turbulent-like structures. When mixed with passive particles phase-separation is known to occur,…

流体动力学 · 物理学 2026-03-26 Alexander Chamolly , Takuji Ishikawa

Low Reynolds number direct simulations of large populations of hydrodynamically interacting swimming particles confined between planar walls are performed. The results of simulations are compared with a theory that describes dilute…

流体动力学 · 物理学 2015-05-13 Juan P. Hernandez-Ortiz , Patrick T. Underhill , Michael D. Graham

We study numerically the hydrodynamics of dip coating from a suspension and report a mechanism for colloidal assembly and pattern formation on smooth and uniform substrates. Below a critical withdrawal speed of the substrate, capillary…

流体动力学 · 物理学 2016-04-27 Carlos E. Colosqui , Jeffrey F. Morris , Howard A. Stone

We present a simple chemical strategy for the formation of a self-propelling cluster via the process of capture and assembly of passive colloids on the surface of a chemically active colloid. The two species of colloids that are isotropic…

生物物理 · 物理学 2019-10-02 Prabha Chuphal , Ishwar Venugopal , Snigdha Thakur

The flagellated bacterium Escherichia coli is increasingly used experimentally as a self-propelled swimmer. To obtain meaningful, quantitative results that are comparable between different laboratories, reproducible protocols are needed to…

Physics governing the locomotion of microorganisms and other microsystems is dominated by viscous damping. An effective swimming strategy involves the non-reciprocal and periodic deformations of the considered body. Here, we show that a…

Bacteria commonly live in structured communities that affect human health and influence ecological systems. Heterogeneous populations, such as motile and non-motile populations, often coexist in bacteria communities. Motile subpopulations…

生物物理 · 物理学 2019-06-19 Haoran Xu , Justas Dauparas , Debasish Das , Eric Lauga , Yilin Wu

Colloidal particles are considered ideal building blocks to produce materials with enhanced physical properties. The state-of-the-art techniques for synthesizing these particles provide control over shape, size, and directionality of the…

软凝聚态物质 · 物理学 2016-12-21 N. A. M. Araújo , C. S. Dias , M. M. Telo da Gama

The field of synthetic active matter has, thus far, been led by efforts to create point-like, isolated (yet interacting) self-propelled objects (\emph{e.g.} colloids, droplets, microrobots) and understanding their collective dynamics. The…

软凝聚态物质 · 物理学 2024-08-06 Manoj Kumar , Aniruddh Murali , Arvin Gopal Subramaniam , Rajesh Singh , Shashi Thutupalli