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We consider a series of image segmentation methods based on the deep neural networks in order to perform semantic segmentation of electroluminescence (EL) images of thin-film modules. We utilize the encoder-decoder deep neural network…

Pre-trained Transformer language models (LM) have become go-to text representation encoders. Prior research fine-tunes deep LMs to encode text sequences such as sentences and passages into single dense vector representations for efficient…

Compression and reconstruction of visual data have been widely studied in the computer vision community, even before the popularization of deep learning. More recently, some have used deep learning to improve or refine existing pipelines,…

Error-bounded lossy compression is becoming an indispensable technique for the success of today's scientific projects with vast volumes of data produced during simulations or instrument data acquisitions. Not only can it significantly…

Cryo-electron tomography (cryo-ET) is an imaging technique that allows three-dimensional visualization of macro-molecular assemblies under near-native conditions. Cryo-ET comes with a number of challenges, mainly low signal-to-noise and…

Atomic resolution imaging in transmission electron microscopy (TEM) and scanning TEM (STEM) of light elements in electron-transparent materials has long been a challenge. Biomolecular materials, for example, are rapidly altered when…

Current Large Language Models (LLMs) face three major challenges: context length limitations, high inference costs, and catastrophic forgetting during continual learning. While Mixture-of-Experts (MoE) architectures mitigate some of these…

This paper presents a cross channel context model for latents in deep image compression. Generally, deep image compression is based on an autoencoder framework, which transforms the original image to latents at the encoder and recovers the…

Constructing atomic models from cryo-electron microscopy (cryo-EM) maps is a crucial yet intricate task in structural biology. While advancements in deep learning, such as convolutional neural networks (CNNs) and graph neural networks…

Four-dimensional scanning transmission electron microscopy (4D-STEM) is a powerful tool that allows for the simultaneous acquisition of spatial and diffraction information, driven by recent advancements in direct electron detector…

This paper focuses on improving the effectiveness of the standard 2-layer MLP projection head featured in the SimCLR framework through the use of pretrained autoencoder embeddings. Given a contrastive learning task with a largely unlabeled…

Efficient querying and retrieval of healthcare data is posing a critical challenge today with numerous connected devices continuously generating petabytes of images, text, and internet of things (IoT) sensor data. One approach to…

Despite evidence for the existence of engrams as memory support structures in our brains, there is no consensus framework in neuroscience as to what their physical implementation might be. Here we propose how we might design a computer…

We show that compact fully connected (FC) deep learning networks trained to classify wireless protocols using a hierarchy of multiple denoising autoencoders (AEs) outperform reference FC networks trained in a typical way, i.e., with a…

In this paper we present a a deep generative model for lossy video compression. We employ a model that consists of a 3D autoencoder with a discrete latent space and an autoregressive prior used for entropy coding. Both autoencoder and prior…

Deep Neural Networks trained as image auto-encoders have recently emerged as a promising direction for advancing the state-of-the-art in image compression. The key challenge in learning such networks is twofold: To deal with quantization,…

Pre-trained Transformer models like T5 and BART have advanced the state of the art on a wide range of text generation tasks. Compressing these models into smaller ones has become critically important for practical use. Common neural network…

The cryo-electron microscopy (Cryo-EM) becomes popular for macromolecular structure determination. However, the 2D images which Cryo-EM detects are of high noise and often mixed with multiple heterogeneous conformations or contamination,…

Automated experiments in 4D Scanning Transmission Electron Microscopy are implemented for rapid discovery of local structures, symmetry-breaking distortions, and internal electric and magnetic fields in complex materials. Deep kernel…

Cryo-electron microscopy (cryo-EM) allows for the high-resolution reconstruction of 3D structures of proteins and other biomolecules. Successful reconstruction of both shape and movement greatly helps understand the fundamental processes of…