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Radiogenomics is an emerging field in cancer research that combines medical imaging data with genomic data to predict patients clinical outcomes. In this paper, we propose a multivariate sparse group lasso joint model to integrate imaging…

统计方法学 · 统计学 2022-06-06 Tiantian Zeng , Md Selim , Jie Zhang , Arnold Stromberg , Jin Chen , Chi Wang

In this work, we propose to tackle the problem of domain generalization in the context of \textit{insufficient samples}. Instead of extracting latent feature embeddings based on deterministic models, we propose to learn a domain-invariant…

机器学习 · 计算机科学 2024-02-12 Kecheng Chen , Elena Gal , Hong Yan , Haoliang Li

This paper proposes a two-stage estimation approach for a spatial misalignment scenario that is motivated by the epidemiological problem of linking pollutant exposures and health outcomes. We use the integrated nested Laplace approximation…

统计方法学 · 统计学 2022-07-21 Stephen Jun Villejo , Janine B Illian , Ben Swallow

Graphical models are commonly used tools for modeling multivariate random variables. While there exist many convenient multivariate distributions such as Gaussian distribution for continuous data, mixed data with the presence of discrete…

机器学习 · 统计学 2014-04-30 Jianqing Fan , Han Liu , Yang Ning , Hui Zou

Studying the effects of air-pollution on health is a key area in environmental epidemiology. An accurate estimation of air-pollution effects requires spatio-temporally resolved datasets of air-pollution, especially, Fine Particulate Matter…

应用统计 · 统计学 2019-03-27 Ron Sarafian , Itai Kloog , Allan C. Just , Johnathan D. Rosenblatt

Reaction diffusion equations have been used to model a wide range of biological phenomenon related to population spread and proliferation from ecology to cancer. It is commonly assumed that individuals in a population have homogeneous…

动力系统 · 数学 2023-04-14 Kyle Nguyen , Erica M. Rutter , Kevin Flores

Spatio-temporal prediction of levels of an environmental exposure is an important problem in environmental epidemiology. Our work is motivated by multiple studies on the spatio-temporal distribution of mobile source, or traffic related,…

应用统计 · 统计学 2014-11-14 Nikolay Bliznyuk , Christopher J. Paciorek , Joel Schwartz , Brent Coull

Disease mapping attempts to explain observed health event counts across areal units, typically using Markov random field models. These models rely on spatial priors to account for variation in raw relative risk or rate estimates. Spatial…

统计方法学 · 统计学 2025-10-03 Garazi Retegui , Alan E. Gelfand , Jaione Etxeberria , María Dolores Ugarte

Despite recent advancements in the field of medical image analysis with the use of pretrained foundation models, the issue of distribution shifts between cross-source images largely remains adamant. To circumvent that issue, investigators…

计算机视觉与模式识别 · 计算机科学 2026-04-14 Sanjaya Poudel , Nikita Kunwor , Raj Simkhada , Mustafa Munir , Manish Dhakal , Khem Poudel

Genetic variation in human populations is influenced by geographic ancestry due to spatial locality in historical mating and migration patterns. Spatial population structure in genetic datasets has been traditionally analyzed using either…

种群与进化 · 定量生物学 2016-10-26 Anand Bhaskar , Adel Javanmard , Thomas A. Courtade , David Tse

We introduce a statistical procedure that integrates survival data from multiple biomedical studies, to improve the accuracy of predictions of survival or other events, based on individual clinical and genomic profiles, compared to models…

应用统计 · 统计学 2020-07-20 Steffen Ventz , Rahul Mazumder , Lorenzo Trippa

This is the second manuscript in a two-part series that uses diagnostic testing to understand the connection between prevalence (i.e. number of elements in a class), uncertainty quantification (UQ), and classification theory. Part I…

By creating networks of biochemical pathways, communities of micro-organisms are able to modulate the properties of their environment and even the metabolic processes within their hosts. Next-generation high-throughput sequencing has led to…

应用统计 · 统计学 2023-03-28 Molly G. Hayes , Morgan G. I. Langille , Hong Gu

Two-sample testing is a fundamental problem in statistics. Despite its long history, there has been renewed interest in this problem with the advent of high-dimensional and complex data. Specifically, in the machine learning literature,…

统计方法学 · 统计学 2019-11-19 Ilmun Kim , Ann B. Lee , Jing Lei

This paper presents a general framework for obtaining interpretable multivariate discriminative models that allow efficient statistical inference for neuroimage analysis. The framework, termed generative discriminative machine (GDM),…

应用统计 · 统计学 2019-06-04 Erdem Varol , Aristeidis Sotiras , Ke Zeng , Christos Davatzikos

Diagnostic imaging often requires the simultaneous identification of a multitude of findings of varied size and appearance. Beyond global indication of said findings, the prediction and display of localization information improves trust in…

计算机视觉与模式识别 · 计算机科学 2018-03-22 Li Yao , Jordan Prosky , Eric Poblenz , Ben Covington , Kevin Lyman

Gathering observational data for medical decision-making often involves uncertainties arising from both type I (false positive)and type II (false negative) errors. In this work, we develop a statistical model to study how medical…

应用统计 · 统计学 2025-10-21 Lucas Böttcher , Maria R. D'Orsogna , Tom Chou

Given genetic variations and various phenotypical traits, such as Magnetic Resonance Imaging (MRI) features, we consider two important and related tasks in biomedical research: i)to select genetic and phenotypical markers for disease…

机器学习 · 计算机科学 2013-10-17 Shandian Zhe , Zenglin Xu , Yuan Qi

The problems of large-scale multiple testing are often encountered in modern scientific researches. Conventional multiple testing procedures usually suffer considerable loss of testing efficiency due to the lack of consideration of…

统计方法学 · 统计学 2022-12-21 Pengfei Wang , Zhaofeng Tian

The main goal of disease mapping is to estimate disease risk and identify high-risk areas. Such analyses are hampered by the limited geographical resolution of the available data. Typically the available data are counts per spatial unit and…

应用统计 · 统计学 2019-12-02 Garyfallos Konstantinoudis , Dominic Schuhmacher , Håvard Rue , Ben Spycher