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Quantitative single cell measurements have shown that cell cycle duration (the time between cell divisions) for diverse cell types is a noisy variable. The underlying distribution is mean scalable with a universal shape for many cell types…

细胞行为 · 定量生物学 2016-03-07 Nash Rochman , Fangwei Si , Sean X. Sun

Homeostasis, broadly speaking, refers to the maintenance of a stable internal state when faced with external stimuli. Failure to manage these regulatory processes can lead to different diseases or death. Most physiologists and cell…

动力系统 · 数学 2025-05-20 Christopher J. Ryzowicz , Richard Bertram , Bhargav R. Karamched

We consider a class of biologically-motivated stochastic processes in which a unicellular organism divides its resources (volume or damaged proteins, in particular) symmetrically or asymmetrically between its progeny. Assuming the final…

定量方法 · 定量生物学 2016-07-20 Andrew Marantan , Ariel Amir

Uncovering the quantitative laws that govern the growth and division of single cells remains a major challenge. Using a unique combination of technologies that yields unprecedented statistical precision, we find that the sizes of individual…

Continuum models for the spatial dynamics of growing cell populations have been widely used to investigate the mechanisms underpinning tissue development and tumour invasion. These models consist of nonlinear partial differential equations…

组织与器官 · 定量生物学 2019-07-15 Mark AJ Chaplain , Tommaso Lorenzi , Fiona R Macfarlane

Single-cell experiments have revealed cell-to-cell variability in generation times and growth rates for genetically identical cells. Theoretical models relating the fluctuating generation times of single cells to the population growth rate…

种群与进化 · 定量生物学 2020-01-15 Jie Lin , Ariel Amir

Cells control their size to cope with noise during growth and division. Eukaryotic cells exhibiting "sizer" control (targeting a specific size before dividing) may rely on molecular concentration thresholds, but simple implementations of…

生物物理 · 物理学 2026-05-08 Motasem ElGamel , Lucas Ribaudo , Andrew Mugler

We introduce a general theoretical framework to study the shape dynamics of actively growing and remodeling surfaces. Using this framework we develop a physical model for growing bacterial cell walls and study the interplay of cell shape…

生物物理 · 物理学 2016-04-08 Shiladitya Banerjee , Norbert F. Scherer , Aaron R. Dinner

Cell division and death can be regulated by the mechanical forces within a tissue. We study the consequences for the stability and roughness of a propagating interface, by analysing a model of mechanically-regulated tissue growth in the…

生物物理 · 物理学 2018-12-12 John J. Williamson , Guillaume Salbreux

Heterogeneous systems of active matter exhibit a range of complex emergent dynamical patterns. In particular, it is difficult to predict the properties of the mixed system based on its constituents. These considerations are particularly…

软凝聚态物质 · 物理学 2021-04-07 Shlomit Peled , Shawn D. Ryan , Sebastian Heidenreich , Markus Bar , Gil Ariel , Avraham Be'er

Heterogeneity in biological molecules, resulting in molecule-to-molecule variations in their dynamics and function, is an emerging theme. To elucidate the consequences of heterogeneous behavior at the single molecule level, we propose an…

生物物理 · 物理学 2017-01-24 Changbong Hyeon , Michael Hinczewski , D. Thirumalai

A dynamical systems scenario for developmental cell biology is proposed, based on numerical studies of a system with interacting units with internal dynamics and reproduction. Diversification, formation of discrete and recursive types, and…

chao-dyn · 物理学 2009-10-31 Kunihiko Kaneko , Chikara Furusawa

A dynamic model for cell differentiation is studied, where cells with internal chemical reaction dynamics interact with each other and replicate. It leads to spontaneous differentiation of cells and determination, as is discussed in the…

adap-org · 物理学 2007-05-23 Chikara Furusawa , Kunihiko Kaneko

Cell size control is crucial for maintaining cellular function and homeostasis. In this study, we develop a first-order partial differential equation model to examine the effects of three key size control mechanisms: the sizer, timer, and…

细胞行为 · 定量生物学 2025-05-27 Shuqi Fan , Jinzhi Lei

Isogenic Escherichia coli growing exponentially in a constant environment display large variation in growth-rates, division-sizes and generation-times. It is unclear how these seemingly random cell cycles can be reconciled with the precise…

定量方法 · 定量生物学 2015-10-14 Mats Wallden , David Fange , Özden Baltekin , Johan Elf

Cell growth and gene expression, essential elements of all living systems, have long been the focus of biophysical interrogation. Advances in single-cell methods have invigorated theoretical studies into these processes. However, until…

亚细胞过程 · 定量生物学 2023-11-22 Ido Golding , Ariel Amir

Understanding the rules underlying organismal development is a major unsolved problem in biology. Each cell in a developing organism responds to signals in its local environment by dividing, excreting, consuming, or reorganizing, yet how…

细胞行为 · 定量生物学 2025-08-20 Ramya Deshpande , Francesco Mottes , Ariana-Dalia Vlad , Michael P. Brenner , Alma dal Co

A biological system achieve homeostasis when there is a regulated quantity that is maintained within a narrow range of values. Here we consider homeostasis as a phenomenon of network dynamics. In this context, we improve a general theory…

分子网络 · 定量生物学 2024-05-08 João Luiz de Oliveira Madeira , Fernando Antoneli

To maintain a constant cell size, dividing cells have to coordinate cell cycle events with cell growth. This coordination has for long been supposed to rely on the existence of size thresholds determining cell cycle progression [1]. In…

细胞行为 · 定量生物学 2016-11-04 Ilya Soifer , Lydia Robert , Ariel Amir

Existing studies comparing individual-based models of growing cell populations and their continuum counterparts have mainly focused on homogeneous populations, in which all cells have the same phenotypic characteristics. However,…

种群与进化 · 定量生物学 2022-06-06 Fiona R Macfarlane , Xinran Ruan , Tommaso Lorenzi