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Large numbers of MS/MS peptide spectra generated in proteomics experiments require efficient, sensitive and specific algorithms for peptide identification. In the Open Mass Spectrometry Search Algorithm [OMSSA], specificity is calculated by…

There is extensive evidence that biological neural networks encode information in the precise timing of the spikes generated and transmitted by neurons, which offers several advantages over rate-based codes. Here we adopt a vector space…

神经元与认知 · 定量生物学 2019-07-16 Dorian Florescu , Daniel Coca

Online learning with multiple kernels has gained increasing interests in recent years and found many applications. For classification tasks, Online Multiple Kernel Classification (OMKC), which learns a kernel based classifier by seeking the…

机器学习 · 计算机科学 2015-11-19 Jing Lu , Steven C. H. Hoi , Doyen Sahoo , Peilin Zhao

Online Learning to Rank (OLTR) methods optimize rankers based on user interactions. State-of-the-art OLTR methods are built specifically for linear models. Their approaches do not extend well to non-linear models such as neural networks. We…

信息检索 · 计算机科学 2018-09-25 Harrie Oosterhuis , Maarten de Rijke

As the size and richness of available datasets grow larger, the opportunities for solving increasingly challenging problems with algorithms learning directly from data grow at the same pace. Consequently, the capability of learning…

机器学习 · 计算机科学 2019-12-13 Raffaello Camoriano

Accurate predictions of peptide retention times (RT) in liquid chromatography have many applications in mass spectrometry-based proteomics. Herein, we present DeepRT, a deep learning based software for peptide retention time prediction.…

定量方法 · 定量生物学 2017-05-17 Chunwei Ma , Zhiyong Zhu , Jun Ye , Jiarui Yang , Jianguo Pei , Shaohang Xu , Ruo Zhou , Chang Yu , Fan Mo , Bo Wen , Siqi Liu

Large-scale supervised classification algorithms, especially those based on deep convolutional neural networks (DCNNs), require vast amounts of training data to achieve state-of-the-art performance. Decreasing this data requirement would…

计算机视觉与模式识别 · 计算机科学 2016-06-15 Maya Kabkab , Azadeh Alavi , Rama Chellappa

Kernel-based methods enjoy powerful generalization capabilities in handling a variety of learning tasks. When such methods are provided with sufficient training data, broadly-applicable classes of nonlinear functions can be approximated…

机器学习 · 统计学 2017-12-29 Fatemeh Sheikholeslami , Dimitris Berberidis , Georgios B. Giannakis

Deep neural networks (DNNs) demonstrate significant advantages in improving ranking performance in retrieval tasks. Driven by the recent technical developments in optimization and generalization of DNNs, learning a neural ranking model…

信息检索 · 计算机科学 2022-09-27 Yiling Jia , Hongning Wang

Joint channel estimation and signal detection (JCESD) is crucial in orthogonal frequency division multiplexing (OFDM) systems, but traditional algorithms perform poorly in low signal-to-noise ratio (SNR) scenarios. Deep learning (DL)…

信号处理 · 电气工程与系统科学 2024-06-24 Haocheng Ju , Haimiao Zhang , Lin Li , Xiao Li , Bin Dong

Online learning is the cornerstone of applications like recommendation and advertising systems, where models continuously adapt to shifting data distributions. Model training for such systems is remarkably expensive, a cost that multiplies…

Continual learning in online scenario aims to learn a sequence of new tasks from data stream using each data only once for training, which is more realistic than in offline mode assuming data from new task are all available. However, this…

计算机视觉与模式识别 · 计算机科学 2021-10-19 Jiangpeng He , Fengqing Zhu

The increased computerization in recent years has resulted in the production of a variety of different software, however measures need to be taken to ensure that the produced software isn't defective. Many researchers have worked in this…

软件工程 · 计算机科学 2023-04-06 Param Khakhar and , Rahul Kumar Dubey

Most real-world datasets, and particularly those collected from physical systems, are full of noise, packet loss, and other imperfections. However, most specification mining, anomaly detection and other such algorithms assume, or even…

机器学习 · 计算机科学 2019-04-12 Ilia Sucholutsky , Apurva Narayan , Matthias Schonlau , Sebastian Fischmeister

In this brief paper, we investigate online training of Long Short Term Memory (LSTM) architectures in a distributed network of nodes, where each node employs an LSTM based structure for online regression. In particular, each node…

信号处理 · 电气工程与系统科学 2020-02-25 Tolga Ergen , Suleyman Serdar Kozat

The stringent memory and power constraints required in edge-computing sensory-processing applications have made event-driven neuromorphic systems a promising technology. On-chip online learning provides such systems the ability to learn the…

As more data are produced each day, and faster, data stream mining is growing in importance, making clear the need for algorithms able to fast process these data. Data stream mining algorithms are meant to be solutions to extract knowledge…

With the development of federated learning (FL), mobile devices (MDs) are able to train their local models with private data and sends them to a central server for aggregation, thereby preventing sensitive raw data leakage. In this paper,…

分布式、并行与集群计算 · 计算机科学 2021-06-15 Shunfeng Chu , Jun Li , Jianxin Wang , Zhe Wang , Ming Ding , Yijin Zang , Yuwen Qian , Wen Chen

Offline reinforcement-learning (RL) algorithms learn to make decisions using a given, fixed training dataset without online data collection. This problem setting is captivating because it holds the promise of utilizing previously collected…

机器学习 · 计算机科学 2022-12-07 Dan Elbaz , Gal Novik , Oren Salzman

Existing research into online multi-label classification, such as online sequential multi-label extreme learning machine (OSML-ELM) and stochastic gradient descent (SGD), has achieved promising performance. However, these works do not take…

机器学习 · 计算机科学 2020-06-15 Xiuwen Gong , Jiahui Yang , Dong Yuan , Wei Bao