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Skin cancer is one of the deadly types of cancer and is common in the world. Recently, there has been a huge jump in the rate of people getting skin cancer. For this reason, the number of studies on skin cancer classification with deep…

图像与视频处理 · 电气工程与系统科学 2021-10-26 Abdurrahim Yilmaz , Mucahit Kalebasi , Yegor Samoylenko , Mehmet Erhan Guvenilir , Huseyin Uvet

Automatic classification of pigmented, non-pigmented, and depigmented non-melanocytic skin lesions have garnered lots of attention in recent years. However, imaging variations in skin texture, lesion shape, depigmentation contrast, lighting…

计算机视觉与模式识别 · 计算机科学 2022-09-07 Suraj Mishra , Yizhe Zhang , Li Zhang , Tianyu Zhang , X. Sharon Hu , Danny Z. Chen

Patch classification models based on deep learning have been utilized in whole-slide images (WSI) of H&E-stained tissue samples to assist pathologists in grading follicular lymphoma patients. However, these approaches still require…

A vast majority of mass spectrometry data remains uncharacterized, leaving much of its biological and chemical information untapped. Recent advances in machine learning have begun to address this gap, particularly for tasks such as spectral…

Tandem mass spectrometry (MS/MS) is a high-throughput technology used toidentify the proteins in a complex biological sample, such as a drop of blood. A collection of spectra is generated at the output of the process, each spectrum of which…

定量方法 · 定量生物学 2019-09-06 John T. Halloran , David M. Rocke

The current study of cell architecture of inflammation in histopathology images commonly performed for diagnosis and research purposes excludes a lot of information available on the biopsy slide. In autoimmune diseases, major outstanding…

图像与视频处理 · 电气工程与系统科学 2022-10-25 Pranav Singh , Jacopo Cirrone

Quantitative phase imaging (QPI) has been widely applied in characterizing cells and tissues. Spatial light interference microscopy (SLIM) is a highly sensitive QPI method, due to its partially coherent illumination and common path…

图像与视频处理 · 电气工程与系统科学 2024-06-12 Yuheng Jiao , Yuchen R. He , Mikhail E. Kandel , Xiaojun Liu , Wenlong Lu , Gabriel Popescu

3D microscopy is key in the investigation of diverse biological systems, and the ever increasing availability of large datasets demands automatic cell identification methods that not only are accurate, but also can imply the uncertainty in…

计算机视觉与模式识别 · 计算机科学 2021-02-24 Alvaro Gomariz , Tiziano Portenier , César Nombela-Arrieta , Orcun Goksel

Deep learning has significantly advanced molecular modeling and design, enabling efficient understanding and discovery of novel molecules. In particular, large language models (LLMs) introduce a fresh research paradigm to tackle scientific…

机器学习 · 计算机科学 2025-01-06 Pengfei Liu , Jun Tao , Zhixiang Ren

Predicting the biophysical and functional properties of proteins is essential for in silico protein design. Machine learning has emerged as a promising technique for such prediction tasks. However, the relative scarcity of in vitro…

Advanced deep learning (DL) algorithms may predict the patient's risk of developing breast cancer based on the Breast Imaging Reporting and Data System (BI-RADS) and density standards. Recent studies have suggested that the combination of…

图像与视频处理 · 电气工程与系统科学 2022-04-19 Huyen T. X. Nguyen , Sam B. Tran , Dung B. Nguyen , Hieu H. Pham , Ha Q. Nguyen

The presence of certain clinical dermoscopic features within a skin lesion may indicate melanoma, and automatically detecting these features may lead to more quantitative and reproducible diagnoses. We reformulate the task of classifying…

计算机视觉与模式识别 · 计算机科学 2019-03-28 Jeremy Kawahara , Ghassan Hamarneh

Deep learning models (DLMs) frequently achieve accurate segmentation and classification of tumors from medical images. However, DLMs lacking feedback on their image segmentation mechanisms, such as Dice coefficients and confidence in their…

图像与视频处理 · 电气工程与系统科学 2024-12-31 Elhoucine Elfatimi , Pratik Shah

Motivation: Assigning statistical significance accurately has become increasingly important as meta data of many types, often assembled in hierarchies, are constructed and combined for further biological analyses. Statistical inaccuracy of…

定量方法 · 定量生物学 2014-07-25 Gelio Alves , Yi-Kuo Yu

This paper proposes DeepMarks, a novel end-to-end framework for systematic fingerprinting in the context of Deep Learning (DL). Remarkable progress has been made in the area of deep learning. Sharing the trained DL models has become a trend…

密码学与安全 · 计算机科学 2018-04-11 Huili Chen , Bita Darvish Rohani , Farinaz Koushanfar

Acute lymphoblastic leukaemia (ALL) is a blood malignancy that mainly affects adults and children. This study looks into the use of deep learning, specifically Convolutional Neural Networks (CNNs), for the detection and classification of…

图像与视频处理 · 电气工程与系统科学 2024-09-11 Sabit Ahamed Preanto , Md. Taimur Ahad , Yousuf Rayhan Emon , Sumaya Mustofa , Md Alamin

The research explores the utilization of a deep learning model employing an attention mechanism in medical text mining. It targets the challenge of analyzing unstructured text information within medical data. This research seeks to enhance…

计算与语言 · 计算机科学 2024-06-04 Lingxi Xiao , Muqing Li , Yinqiu Feng , Meiqi Wang , Ziyi Zhu , Zexi Chen

Untargeted metabolomics using LC-MS/MS offers the potential to comprehensively profile the chemical diversity of biological samples. However, the process is fundamentally limited by the "identification bottleneck," where only a small…

定量方法 · 定量生物学 2025-10-14 Hansol Hong , Sangwon Lee , Jang-Ho Ha , Sung-June Chu , So-Hee An , Woo-Hyun Paek , Gyuhwa Chung , Kyoung Tai No

Automated skin lesion classification using deep learning has shown remarkable accuracy, yet clinical adoption remains limited due to the "black box" nature of these models. We present MelanomaNet, an explainable deep learning system for…

计算机视觉与模式识别 · 计算机科学 2025-12-11 Sukhrobbek Ilyosbekov

Epilepsy is a disorder of the brain denoted by frequent seizures. The symptoms of seizure include confusion, abnormal staring, and rapid, sudden, and uncontrollable hand movements. Epileptic seizure detection methods involve neurological…

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