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The fields of Origin of Life and Artificial Life both question what life is and how it emerges from a distinct set of "pre-life" dynamics. One common feature of most substrates where life emerges is a marked shift in dynamics when…

We propose an alternative to the prevailing two origin of life narratives, one based on a replicator first hypothesis, and one based on a metabolism first hypothesis. Both hypotheses have known difficulties: All known evolvable molecular…

种群与进化 · 定量生物学 2017-06-20 Nicholas Guttenberg , Nathaniel Virgo , Chris Butch , Norman Packard

Self-replicability is the unique attribute observed in all the living organisms and the question how the life was physically initiated could be equivalent to the question how self-replicating informative polymers were formed in the abiotic…

生物物理 · 物理学 2023-05-24 Yasuji Sawada , Yasukazu Daigaku , Kenji Toma

Due to the asymmetric nature of the nucleotides, the extant informational biomolecule, DNA, is constrained to replicate unidirectionally on a template. As a product of molecular evolution that sought to maximize replicative potential, DNA's…

生物大分子 · 定量生物学 2017-08-10 Hemachander Subramanian , Robert A. Gatenby

Explaining the origin of life requires us to explain how self-replication arises. To be specific, how can a self-replicating entity develop spontaneously from a chemical reaction system in which no reaction is self-replicating? Previously…

适应与自组织系统 · 物理学 2020-12-18 Yu Liu , David Sumpter

While all organisms on Earth descend from a common ancestor, there is no consensus on whether the origin of this ancestral self-replicator was a one-off event or whether it was only the final survivor of multiple origins. Here we use the…

种群与进化 · 定量生物学 2017-01-17 Nitash C G , Thomas LaBar , Arend Hintze , Christoph Adami

Research investigating the origins of life usually focuses on exploring possible life-bearing chemistries in the pre-biotic Earth, or else on synthetic approaches. Little work has been done exploring fundamental issues concerning the…

种群与进化 · 定量生物学 2015-06-24 Christoph Adami

Each living species carries a complex DNA sequence that determines their unique features and functionalities. It is generally assumed that life started from a random pool of oligonucleotides sequences, generated by a prebiotic…

生物物理 · 物理学 2019-04-03 Shoichi Toyabe , Dieter Braun

The emergence of longer information-carrying and functional nucleotide polymers from random short strands was a major stepping stone at the dawn of life. But the formation of those polymers under temperature oscillation required some form…

生物物理 · 物理学 2020-08-19 Patrick W. Kudella , Alexei V. Tkachenko , Sergei Maslov , Dieter Braun

A poorly understood step in the transition from a chemical to a biological world is the emergence of self-replicating molecular systems. We study how a precursor for such a replicator might arise in a hydrothermal RNA reactor, which…

生物大分子 · 定量生物学 2011-06-30 B. Obermayer , H. Krammer , D. Braun , U. Gerland

It is well known that life on Earth alters its environment over evolutionary and geological timescales. An important open question is whether this is a result of evolutionary optimization or a universal feature of life. In the latter case,…

适应与自组织系统 · 物理学 2017-04-26 Cole Mathis , Tanmoy Bhattacharya , Sara Imari Walker

Background: The idea that autocatalytic sets played an important role in the origin of life is not new. However, the likelihood of autocatalytic sets emerging spontaneously has long been debated. Recently, progress has been made along two…

分子网络 · 定量生物学 2012-11-16 Wim Hordijk , Mike Steel

Ultraviolet light incident on organic material can initiate its spontaneous dissipative structuring into chromophores which can then catalyze their own replication. This may have been the case for one of the most ancient of all chromophores…

生物物理 · 物理学 2020-09-07 Julián Mejía , Karo Michaelian

The dominant paradigm in origin of life research is that of an RNA world. However, despite experimental progress towards the spontaneous formation of RNA, the RNA world hypothesis still has its problems. Here, we introduce a novel…

分子网络 · 定量生物学 2017-01-31 Wim Hordijk

Artificial organisms are computer programs that self-replicate, mutate, compete and evolve. How do these lifelike information-processing behaviours could arise in diverse far-from-equilibrium physical systems remains an open question. Here,…

量子物理 · 物理学 2021-08-13 Daniel Valente

The poly-tRNA model was recently presented for the origin and evolution of genetic coding. This model has led to a rather precise description of what might have occurred at the beginning of protein synthesis in the first life form. Here, we…

种群与进化 · 定量生物学 2020-08-17 Jacques H. Daniel

The origin of life must have been preceded by Darwin-like evolutionary dynamics that could propagate it. How did that adaptive dynamics arise? And from what prebiotic molecules? Using evolutionary invasion analysis, we develop a universal…

种群与进化 · 定量生物学 2024-07-25 Charles D. Kocher , Ken A. Dill

The analysis of correlations of amino acid occurrences in globular proteins has led to the development of statistical tools that can identify native contacts -- portions of the chains that come to close distance in folded structural…

生物大分子 · 定量生物学 2014-07-28 Rocío Espada , R. Gonzalo Parra , Thierry Mora , Aleksandra M. Walczak , Diego Ferreiro

The RNA World hypothesis predicts that self-replicating RNAs evolved before DNA genomes and coded proteins. Despite widespread support for the RNA World, self-replicating RNAs have yet to be identified in a natural context, leaving a key…

生物大分子 · 定量生物学 2025-03-12 Jacob L. Fine , Alan M. Moses

About 4 billion years ago, the Earth probably fulfilled the environmental conditions necessary to favour the transition from primitive chemistry to life. Based on a theoretical hairpin duplication origin of tRNAs and their putative…

生物物理 · 物理学 2025-01-27 Juan Jimenez
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