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For the first time, we report a unified microscopic-macroscopic Monte Carlo simulation of gas-grain chemistry in cold interstellar clouds in which both the gas-phase and the grain surface chemistry are simulated by a stochastic technique.…

星系天体物理 · 物理学 2015-06-11 Qiang Chang , Eric Herbst

Data imputation and data generation have important applications for many domains, like healthcare and finance, where incomplete or missing data can hinder accurate analysis and decision-making. Diffusion models have emerged as powerful…

机器学习 · 计算机科学 2025-06-10 Mario Villaizán-Vallelado , Matteo Salvatori , Carlos Segura , Ioannis Arapakis

We investigate the inclusion of variable spins in electronic structure quantum Monte Carlo, with a focus on diffusion Monte Carlo with Hamiltonians that include spin-orbit interactions. Following our previous introduction of fixed-phase…

计算物理 · 物理学 2016-07-27 Cody A. Melton , M. Chandler Bennett , Lubos Mitas

The phase diagram of soft spheres with size dispersion has been studied by means of an optimized Monte Carlo algorithm which allows to equilibrate below the kinetic glass transition for all sizes distribution. The system ubiquitously…

软凝聚态物质 · 物理学 2007-05-23 L. A. Fernandez , V. Martin-Mayor , P. Verrocchio

Monte Carlo simulation provides a powerful tool for understanding and exploring thermodynamic phase equilibria in many-particle interacting systems. Among the most physically intuitive simulation methods is Gibbs ensemble Monte Carlo…

统计力学 · 物理学 2015-06-12 Alan R. Denton , Michael P. Schmidt

Generative diffusions are a powerful class of Monte Carlo samplers that leverage bridging Markov processes to approximate complex, high-dimensional distributions, such as those found in image processing and language models. Despite their…

机器学习 · 统计学 2025-02-20 Zheng Zhao , Ziwei Luo , Jens Sjölund , Thomas B. Schön

Numerical solution of reaction-diffusion equations in three dimensions is one of the most challenging applied mathematical problems. Since these simulations are very time consuming, any ideas and strategies aiming at the reduction of CPU…

计算物理 · 物理学 2011-08-17 Ferenc Molnar , Ferenc Izsak , Robert Meszaros , Istvan Lagzi

In this paper, we present splitting algorithms to solve multicomponent transport models with Maxwell-Stefan-diffusion approaches. The multicomponent models are related to transport problems, while we consider plasma processes, in which the…

数值分析 · 数学 2023-06-27 Juergen Geiser

We have used the master equation approach to study a moderately complex network of diffusive reactions occurring on the surfaces of interstellar dust particles. This network is meant to apply to dense clouds in which a large portion of the…

天体物理学 · 物理学 2009-11-10 T. Stantcheva , V. I. Shematovich , E. Herbst

We study the dynamical behavior of disordered many-particle systems with long-range Coulomb interactions by means of damage-spreading simulations. In this type of Monte-Carlo simulations one investigates the time evolution of the damage,…

统计力学 · 物理学 2009-10-28 Torsten Wappler , Michael Schreiber , Thomas Vojta

This work describes three diffuse-interface methods for the simulation of immiscible, compressible multiphase fluid flows and elastic-plastic deformation in solids. The first method is the localized-artificial-diffusivity approach of Cook…

计算物理 · 物理学 2021-09-21 Suhas S. Jain , Michael C. Adler , Jacob R. West , Ali Mani , Parviz Moin , Sanjiva K. Lele

Light propagation in turbid media is driven by the equation of radiative transfer. We give a formal probabilistic representation of its solution in the framework of biological tissues and we implement algorithms based on Monte Carlo methods…

统计计算 · 统计学 2014-10-16 Laura Vinckenbosch , Céline Lacaux , Samy Tindel , Magalie Thomassin , Tiphaine Obara

Reaction-diffusion systems where transition rates exhibit quenched disorder are common in physical and chemical systems. We study pair reactions on a periodic two-dimensional lattice, including continuous deposition and spontaneous…

无序系统与神经网络 · 物理学 2010-11-10 A. Wolff , I. Lohmar , J. Krug , Y. Frank , O. Biham

Spatial resolution is a significant factor in the GEM performance in view of X-rays radiography and UV, visible light imaging. Monte-Carlo method is used to investigate the spatial resolution determined by the transverse diffusion in the…

仪器与探测器 · 物理学 2013-12-13 Yang Lan-Lan , Tu Yan , MA Shan-Le , Zhang Pan-Pan

Solvent-free coarse grained models represent one of the most promising approaches for molecular simulations of mesoscopically large membranes. In these models, the size of the simulated membrane is limited by the slow relaxation time of…

软凝聚态物质 · 物理学 2009-11-13 Oded Farago

Nambu-Goto model is investigated by using the canonical Monte Carlo simulation technique on dynamically triangulated surfaces of spherical topology. We find that the model has four distinct phases; crumpled, branched-polymer, linear, and…

统计力学 · 物理学 2007-10-25 Hiroshi Koibuchi

An analytical soluble model based on a Continuous Time Random Walk (CTRW) scheme for the adsorption-desorption processes at interfaces, called bulk-mediated surface diffusion, is presented. The time evolution of the effective probability…

凝聚态物理 · 物理学 2009-11-10 Jorge A. Revelli , Carlos. E. Budde , Domingo Prato , Horacio S. Wio

Translational diffusion coefficients are routinely estimated from molecular dynamics simulations. Linear fits to mean squared displacement (MSD) curves have become the de facto standard, from simple liquids to complex biomacromolecules.…

计算物理 · 物理学 2020-11-20 Jakob Tómas Bullerjahn , Sören von Bülow , Gerhard Hummer

We present a position Langevin equation for overdamped particle motion on rough two-dimensional surfaces. A Brownian Dynamics algorithm is suggested to evolve this equation numerically, allowing for the prediction of effective (projected)…

软凝聚态物质 · 物理学 2009-11-13 Ali Naji , Frank L. H. Brown

We investigate the adsorption and diffusion behaviors of CO2, CH4, and N2 in interfacial systems composed of a polymer of intrinsic microporosity (PIM-1) and amorphous silica using grand canonical Monte Carlo (GCMC) and molecular dynamics…