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Regularization method and Bayesian inverse method are two dominating ways for solving inverse problems generated from various fields, e.g., seismic exploration and medical imaging. The two methods are related with each other by the MAP…

数值分析 · 数学 2019-06-18 Junxiong Jia , Qihang Sun , Bangyu Wu , Jigen Peng

This paper proposes an adaptive random experiment design (ARED) algorithm that can be applied to optimize the multiple factors and levels experiments. The algorithm takes real-time model error as the adaptive condition, and outputs a model…

信号处理 · 电气工程与系统科学 2020-09-01 Zhou Qiao , Duan Xiaochang , Tang Wei

The basis generation in reduced order modeling usually requires multiple high-fidelity large-scale simulations that could take a huge computational cost. In order to accelerate these numerical simulations, we introduce a FOM/ROM hybrid…

数值分析 · 数学 2021-03-17 Lihong Feng , Guosheng Fu , Zhu Wang

Molecular Dynamics - Green's Functions Reaction Dynamics (MD-GFRD) is a multiscale simulation method for particle dynamics or particle-based reaction-diffusion dynamics that is suited for systems involving low particle densities. Particles…

化学物理 · 物理学 2017-12-06 Luigi Sbailò , Frank Noé

Agent-based modeling (ABM) is a powerful computational approach for studying complex biological and biomedical systems, yet its widespread use remains limited by significant computational demands. As models become increasingly…

定量方法 · 定量生物学 2025-04-17 Kerri-Ann Norton , Daniel Bergman , Harsh Vardhan Jain , Trachette Jackson

This study introduces a first step for constructing a hybrid reduced-order models (ROMs) for segregated fluid-structure interaction in an Arbitrary Lagrangian-Eulerian (ALE) approach at a high Reynolds number using the Finite Volume Method…

流体动力学 · 物理学 2024-10-20 Valentin Nkana Ngan , Giovanni Stabile , Andrea Mola , Gianluigi Rozza

We develop a multiscale hybrid scheme for simulations of soft condensed matter systems, which allows one to treat the system at the particle level in selected regions of space, and at the continuum level elsewhere. It is derived…

软凝聚态物质 · 物理学 2015-06-17 Shuanhu Qi , Hans Behringer , Friederike Schmid

This article extends the preprint "Characterizing Agent-Based Model Dynamics via $\epsilon$-Machines and Kolmogorov-Style Complexity" by introducing diffusion models as orthogonal and complementary tools for characterizing the output of…

多智能体系统 · 计算机科学 2025-12-05 Roberto Garrone

A new approach to simulating warm and hot dense matter that combines density functional theory based calculations of the electronic structure to classical molecular dynamics simulations with pair interaction potentials is presented. The new…

等离子体物理 · 物理学 2015-06-22 C. E. Starrett , J. Daligault , D. Saumon

We report a novel hybrid method of simultaneous atomistic simulation of solids in critical regions (contacts surfaces, cracks areas, etc.), along with continuum modeling of other parts. The continuum is treated in terms of quasi-atoms of…

材料科学 · 物理学 2026-02-17 Artem Chuprov , Egor E. Nuzhin , Alexey A. Tsukanov , Nikolay V. Brilliantov

Both discrete and continuum models have been widely used to study rapid granular flow, discrete model is accurate but computationally expensive, whereas continuum model is computationally efficient but its accuracy is doubtful in many…

流体动力学 · 物理学 2015-12-24 Xizhong Chen , Junwu Wang , Jinghai Li

The development of novel materials in recent years has been accelerated greatly by the use of computational modelling techniques aimed at elucidating the complex physics controlling microstructure formation in materials, the properties of…

材料科学 · 物理学 2025-11-14 Damien Pinto , Michael Greenwood , Nikolas Provatas

We present a new adaptive resolution technique for efficient particle-based multiscale molecular dynamics (MD) simulations. The presented approach is tailor-made for molecular systems where atomistic resolution is required only in spatially…

软凝聚态物质 · 物理学 2007-05-23 Matej Praprotnik , Luigi Delle Site , Kurt Kremer

Open biochemical systems of interacting molecules are ubiquitous in life-related processes. However, established computational methodologies, like molecular dynamics, are still mostly constrained to closed systems and timescales too small…

定量方法 · 定量生物学 2025-10-15 Margarita Kostré , Christof Schütte , Frank Noé , Mauricio J. del Razo

Computational studies that use block-structured adaptive mesh refinement (AMR) approaches suffer from unnecessarily high mesh resolution in regions adjacent to important solution features. This deficiency limits the performance of AMR…

计算物理 · 物理学 2022-03-02 Brandon Gusto , Tomasz Plewa

The success of vision transformers-especially for generative modeling-is limited by the quadratic cost and weak spatial inductive bias of self-attention. We propose PDE-SSM, a spatial state-space block that replaces attention with a…

机器学习 · 计算机科学 2026-03-17 Eshed Gal , Moshe Eliasof , Siddharth Rout , Eldad Haber

In this article, we present a novel approach for block-structured adaptive mesh refinement (AMR) that is suitable for extreme-scale parallelism. All data structures are designed such that the size of the meta data in each distributed…

分布式、并行与集群计算 · 计算机科学 2018-07-24 Florian Schornbaum , Ulrich Rüde

This study presents a systematic machine learning approach for creating efficient hybrid models and discovering sorption uptake models in non-linear advection-diffusion-sorption systems. It demonstrates an effective method to train these…

计算工程、金融与科学 · 计算机科学 2023-04-27 Vinicius V. Santana , Erbet Costa , Carine M. Rebello , Ana Mafalda Ribeiro , Chris Rackauckas , Idelfonso B. R. Nogueira

Advection-Diffusion-Reaction (ADR) Partial Differential Equations (PDEs) appear in a wide spectrum of applications such as chemical reactors, concentration flows, and biological systems. A large number of these applications require the…

系统与控制 · 电气工程与系统科学 2022-03-29 Ahmed Elkhashap , Dirk Abel

Given multiple images that describe chaotic reaction-diffusion dynamics, parameters of a PDE model are estimated using autosynchronization, where parameters are controlled by synchronization of the model to the observed data. A…

混沌动力学 · 物理学 2015-06-04 Sean Kramer , Eric Bollt