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Graphlets are defined as k-node connected induced subgraph patterns. For an undirected graph, 3-node graphlets include close triangle and open triangle. When k = 4, there are six types of graphlets, e.g., tailed-triangle and clique are two…

机器学习 · 计算机科学 2018-10-09 Xutong Liu , Yu-Zhen Janice Chen , John C. S. Lui , Konstantin Avrachenkov

Graphlets are induced subgraphs of a large network and are important for understanding and modeling complex networks. Despite their practical importance, graphlets have been severely limited to applications and domains with relatively small…

社会与信息网络 · 计算机科学 2017-03-01 Ryan A. Rossi , Rong Zhou , Nesreen K. Ahmed

From social science to biology, numerous applications often rely on graphlets for intuitive and meaningful characterization of networks at both the global macro-level as well as the local micro-level. While graphlets have witnessed a…

社会与信息网络 · 计算机科学 2016-02-17 Nesreen K. Ahmed , Jennifer Neville , Ryan A. Rossi , Nick Duffield , Theodore L. Willke

Graphlets of order $k$ in a graph $G$ are connected subgraphs induced by $k$ nodes (called $k$-graphlets) or by $k$ edges (called edge $k$-graphlets). They are among the interesting subgraphs in network analysis to get insights on both the…

数据结构与算法 · 计算机科学 2025-05-15 Alessio Conte , Roberto Grossi , Yasuaki Kobayashi , Kazuhiro Kurita , Davide Rucci , Takeaki Uno , Kunihiro Wasa

Graphlet analysis is an approach to network analysis that is particularly popular in bioinformatics. We show how to set up a system of linear equations that relate the orbit counts and can be used in an algorithm that is significantly…

数据结构与算法 · 计算机科学 2017-04-12 Tomaž Hočevar , Janez Demšar

In this paper, we introduce a generalization of graphlets to heterogeneous networks called typed graphlets. Informally, typed graphlets are small typed induced subgraphs. Typed graphlets generalize graphlets to rich heterogeneous networks…

社会与信息网络 · 计算机科学 2020-10-28 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

Many applications, ranging from natural to social sciences, rely on graphlet analysis for the intuitive and meaningful characterization of networks employing micro-level structures as building blocks. However, it has not been thoroughly…

社会与信息网络 · 计算机科学 2023-06-06 Colin Cleveland , Chin-Yen Lee , Shen-Fu Tsai , Wei-Hsuan Yu , Hsuan-Wei Lee

Graphlets are subgraphs rooted at a fixed vertex. The number of occurrences of graphlets aligned to a particular vertex, called graphlet degree sequence (gds), gives a topological description of the surrounding of the analyzed vertex.…

组合数学 · 数学 2026-01-01 David Hartman , Aneta Pokorná , Daniel Trlifaj , Lluís Vena

Exploring small connected and induced subgraph patterns (CIS patterns, or graphlets) has recently attracted considerable attention. Despite recent efforts on computing the number of instances a specific graphlet appears in a large graph…

社会与信息网络 · 计算机科学 2016-05-02 Pinghui Wang , Xiangliang Zhang , Zhenguo Li , Jiefeng Cheng , John C. S. Lui , Don Towsley , Junzhou Zhao , Jing Tao , Xiaohong Guan

Networks are widely used to model real-world systems and uncover their topological features. Network properties such as the degree distribution and shortest path length have been computed in numerous real-world networks, and most of them…

社会与信息网络 · 计算机科学 2017-07-17 David Aparício , Pedro Ribeiro , Fernando Silva

Many real-world applications give rise to large heterogeneous networks where nodes and edges can be of any arbitrary type (e.g., user, web page, location). Special cases of such heterogeneous graphs include homogeneous graphs, bipartite,…

社会与信息网络 · 计算机科学 2019-05-14 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

Graphlets are induced subgraph patterns and have been frequently applied to characterize the local topology structures of graphs across various domains, e.g., online social networks (OSNs) and biological networks. Discovering and computing…

社会与信息网络 · 计算机科学 2016-10-19 Xiaowei Chen , Yongkun Li , Pinghui Wang , John C. S. Lui

We introduce the computational problem of graphlet transform of a sparse large graph. Graphlets are fundamental topology elements of all graphs/networks. They can be used as coding elements to encode graph-topological information at…

社会与信息网络 · 计算机科学 2020-09-02 Dimitris Floros , Nikos Pitsianis , Xiaobai Sun

We associate all small subgraph counting problems with a systematic graph encoding/representation system which makes a coherent use of graphlet structures. The system can serve as a unified foundation for studying and connecting many…

离散数学 · 计算机科学 2021-03-22 Dimitris Floros , Nikos Pitsianis , Xiaobai Sun

Random walks are widely used for mining networks due to the computational efficiency of computing them. For instance, graph representation learning learns a d-dimensional embedding space, so that the nodes that tend to co-occur on random…

社会与信息网络 · 计算机科学 2024-05-24 Sam F. L. Windels , Noel Malod-Dognin , Natasa Przulj

Graphs are widely used for modeling various types of interactions, such as email communications and online discussions. Many of such real-world graphs are temporal, and specifically, they grow over time with new nodes and edges. Counting…

社会与信息网络 · 计算机科学 2023-01-04 Deukryeol Yoon , Dongjin Lee , Minyoung Choe , Kijung Shin

Exploratory analysis over network data is often limited by the ability to efficiently calculate graph statistics, which can provide a model-free understanding of the macroscopic properties of a network. We introduce a framework for…

统计方法学 · 统计学 2020-04-17 Kirill Paramonov , Dmitry Shemetov , James Sharpnack

A unit cube in $k$ dimensional space (or \emph{$k$-cube} in short) is defined as the Cartesian product $R_1\times R_2\times...\times R_k$ where $R_i$(for $1\leq i\leq k$) is a closed interval of the form $[a_i,a_i+1]$ on the real line. A…

离散数学 · 计算机科学 2008-03-26 L. Sunil Chandran , Mathew C. Francis , Naveen Sivadasan

Networks are fundamental to the study of complex systems, ranging from social contacts, message transactions, to biological regulations and economical networks. In many realistic applications, these networks may vary over time. Modeling and…

社会与信息网络 · 计算机科学 2020-04-07 Kun Tu , Jian Li , Don Towsley , Dave Braines , Liam Turner

Higher-order connectivity patterns such as small induced sub-graphs called graphlets (network motifs) are vital to understand the important components (modules/functional units) governing the configuration and behavior of complex networks.…

社会与信息网络 · 计算机科学 2020-09-15 Aldo G. Carranza , Ryan A. Rossi , Anup Rao , Eunyee Koh
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