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Subdiffusion has been proposed as an explanation of various kinetic phenomena inside living cells. In order to fascilitate large-scale computational studies of subdiffusive chemical processes, we extend a recently suggested mesoscopic model…

偏微分方程分析 · 数学 2018-02-19 Emilie Blanc , Stefan Engblom , Andreas Hellander , Per Lötstedt

We present a multiscale approach to model diffusion in a crowded environment and its effect on the reaction rates. Diffusion in biological systems is often modeled by a discrete space jump process in order to capture the inherent noise of…

亚细胞过程 · 定量生物学 2016-03-18 Lina Meinecke

The mesosocpic concept is applied to the theory of mixtures. The aim is to investigate the diffusion phenomenon from a mesoscopic point of view. The domain of the field quantities is extended by the set of mesoscopic variables, here the…

统计力学 · 物理学 2007-05-23 A. Palumbo , C. Papenfuss , P. Rogolino

Mathematical models of motility are often based on random-walk descriptions of discrete individuals that can move according to certain rules. It is usually the case that large masses concentrated in small regions of space have a great…

物理与社会 · 物理学 2022-11-23 Carles Falcó

The macroscopic behavior of the solution of a coupled system of partial differential equations arising in the modeling of reaction-diffusion processes in periodic porous media is analyzed. Our mathematical model can be used for studying…

偏微分方程分析 · 数学 2019-06-19 G. Cardone , C. Perugia , C. Timofte

A mesoscopic multi-particle collision model for fluid dynamics is generalized to incorporate the chemical reactions among species that may diffuse at different rates. This generalization provides a means to simulate reaction-diffusion…

化学物理 · 物理学 2016-09-08 K. Tucci , R. Kapral

This chapter focuses on the mathematical modelling of active particles (or agents) in crowded environments. We discuss several microscopic models found in literature and the derivation of the respective macroscopic partial differential…

统计力学 · 物理学 2022-11-11 Maria Bruna , Martin Burger , Jan-Frederik Pietschmann , Marie-Therese Wolfram

We present a model for diffusion in a molecularly crowded environment. The model consists of random barriers in percolation network. Random walks in the presence of slowly moving barriers show normal diffusion for long times, but anomalous…

亚细胞过程 · 定量生物学 2007-06-06 Dietrich Stauffer , Christian Schulze , Dieter W. Heermann

Diffusion models have emerged as powerful generative models in the text-to-image domain. This paper studies their application as observation-to-action models for imitating human behaviour in sequential environments. Human behaviour is…

In this paper we present analytical and random walk based solutions to diffusion in semi-permeable layered media with varying diffusivity. We propose a new random walk transit model (hybrid model) based on treating the membrane permeability…

生物物理 · 物理学 2022-01-27 Ignasi Alemany , Jan N. Rose , Jérôme Garnier-Brun , Andrew D. Scott , Denis J. Doorly

In recent years modelling crowd and evacuation dynamics has become very important, with increasing huge numbers of people gathering around the world for many reasons and events. The fact that our global population grows dramatically every…

物理与社会 · 物理学 2015-01-28 Mohamed H. Dridi

Recently, hybrid models have emerged that combine microscopic and mesoscopic regimes in a single stochastic reaction-diffusion simulation. Microscopic simulations track every individual molecule and are generally more accurate. Mesoscopic…

新兴技术 · 计算机科学 2015-11-20 Adam Noel , Karen C. Cheung , Robert Schober

Modern applications, such as orchestrating the collective behavior of robotic swarms or traffic flows, require the coordination of large groups of agents evolving in unstructured environments, where disturbances and unmodeled dynamics are…

系统与控制 · 电气工程与系统科学 2026-02-11 Gian Carlo Maffettone , Davide Salzano , Mario di Bernardo

Recent progresses in single particle tracking have shown evidences of non-Gaussian distribution of displacements in living cells, both near the cellular membrane and inside the cytoskeleton. A similar behavior has also been observed in…

生物物理 · 物理学 2019-05-30 Yann Lanoiselée , Denis S. Grebenkov

The dynamics of ecological as well as chemical systems may depend on heterogeneous configurations. Heterogeneity in reaction-diffusion systems often increase modelling and simulating difficulties when non-linear effects are present. One…

物理与社会 · 物理学 2019-08-27 Orlando Silva

We introduce a model of interacting Random Walk, whose hopping amplitude depends on the number of walkers/particles on the link. The mesoscopic counterpart of such a microscopic dynamics is a diffusing system whose diffusivity depends on…

统计力学 · 物理学 2008-10-01 E. Agliari , M. Casartelli , A. Vezzani

Computational modelling of diffusion in heterogeneous media is prohibitively expensive for problems with fine-scale heterogeneities. A common strategy for resolving this issue is to decompose the domain into a number of non-overlapping…

计算物理 · 物理学 2021-08-26 Nathan G. March , Elliot J. Carr , Ian W. Turner

In this paper we are concerned with multiscale modeling, control, and simulation of self-organizing agents leaving an unknown area under limited visibility, with special emphasis on crowds. We first introduce a new microscopic model…

最优化与控制 · 数学 2016-10-04 Giacomo Albi , Mattia Bongini , Emiliano Cristiani , Dante Kalise

The spatial distribution of population and activities within urban areas, or urban form at the mesoscopic scale, is the outcome of multiple antagonist processes. We propose in this paper to benchmark different models of urban morphogenesis,…

物理与社会 · 物理学 2020-09-01 Juste Raimbault

Diffusion is a fundamental phenomenon that occurs ubiquitously in nature and remains the subject of continuous research interest. Understanding diffusion is a key to understanding leaving systems. In this Chapter, I discuss diffusion of…

软凝聚态物质 · 物理学 2018-10-15 Svyatoslav Kondrat
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