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This paper explores interpretability techniques for two of the most successful learning algorithms in medical decision-making literature: deep neural networks and random forests. We applied these algorithms in a real-world medical dataset…

机器学习 · 计算机科学 2020-02-24 Catarina Moreira , Renuka Sindhgatta , Chun Ouyang , Peter Bruza , Andreas Wichert

Inferring spatial transcriptomics (ST) from histology enables scalable histogenomic profiling, yet current methods are largely restricted to single-tissue models. This fragmentation fails to leverage biological principles shared across…

机器学习 · 计算机科学 2026-05-13 Susu Hu , Stefanie Speidel

Development and homeostasis in multicellular systems both require exquisite control over spatial molecular pattern formation and maintenance. Advances in spatially-resolved and high-throughput molecular imaging methods such as multiplexed…

定量方法 · 定量生物学 2023-03-30 Alex J. Lee , Robert Cahill , Reza Abbasi-Asl

A fundamental challenge in developing high-impact machine learning technologies is balancing the need to model rich, structured domains with the ability to scale to big data. Many important problem areas are both richly structured and large…

机器学习 · 计算机科学 2017-11-20 Stephen H. Bach , Matthias Broecheler , Bert Huang , Lise Getoor

The automatic analysis of subtle changes between longitudinal MR images is an important task as it is still a challenging issue in scope of the breast medical image processing. In this paper we propose an effective automatic change…

图像与视频处理 · 电气工程与系统科学 2021-10-22 Narges Norouzi , Reza Azmi , Nooshin Noshiri , Robab Anbiaee

Objective: A median of 14.4% of patient undergone at least one adverse event during surgery and a third of them are preventable. The occurrence of adverse events forces surgeons to implement corrective strategies and, thus, deviate from the…

图像与视频处理 · 电气工程与系统科学 2020-03-19 Arnaud Huaulmé , Pierre Jannin , Fabian Reche , Jean-Luc Faucheron , Alexandre Moreau-Gaudry , Sandrine Voros

Automated real-time prediction of the ergonomic risks of manipulating objects is a key unsolved challenge in developing effective human-robot collaboration systems for logistics and manufacturing applications. We present a foundational…

Pringle maneuver (PM) in laparoscopic liver resection aims to reduce blood loss and provide a clear surgical view by intermittently blocking blood inflow of the liver, whereas prolonged PM may cause ischemic injury. To comprehensively…

计算机视觉与模式识别 · 计算机科学 2024-12-18 Diandian Guo , Weixin Si , Zhixi Li , Jialun Pei , Pheng-Ann Heng

Large language models (LLMs) have shown considerable promise in clinical natural language processing, yet few domain-specific datasets exist to rigorously evaluate their performance on radiology tasks. In this work, we introduce an…

计算与语言 · 计算机科学 2025-11-18 Namu Park , Giridhar Kaushik Ramachandran , Kevin Lybarger , Fei Xia , Ozlem Uzuner , Meliha Yetisgen , Martin Gunn

Using supervised machine learning approaches to recognize human activities from on-body wearable accelerometers generally requires a large amount of labelled data. When ground truth information is not available, too expensive, time…

机器学习 · 统计学 2013-12-30 Dorra Trabelsi , Samer Mohammed , Faicel Chamroukhi , Latifa Oukhellou , Yacine Amirat

This paper is concerned with the computational complexity of learning the Hidden Markov Model (HMM). Although HMMs are some of the most widely used tools in sequential and time series modeling, they are cryptographically hard to learn in…

机器学习 · 计算机科学 2024-02-27 Sham M. Kakade , Akshay Krishnamurthy , Gaurav Mahajan , Cyril Zhang

Multiview light sheet fluorescence microscopy (LSFM) allows to image developing organisms in 3D at unprecedented temporal resolution over long periods of time. The resulting massive amounts of raw image data requires extensive processing…

定量方法 · 定量生物学 2015-08-12 Christopher Schmied , Peter Steinbach , Tobias Pietzsch , Stephan Preibisch , Pavel Tomancak

In this paper, we present a novel approach for continuous operator authentication in teleoperated robotic processes based on Hidden Markov Models (HMM). While HMMs were originally developed and widely used in speech recognition, they have…

密码学与安全 · 计算机科学 2022-02-25 Junjie Yan , Kevin Huang , Kyle Lindgren , Tamara Bonaci , Howard Jay Chizeck

Smoking continues to be a major preventable cause of death worldwide, affecting millions through damage to the heart, metabolism, liver, and kidneys. However, current medical screening methods often miss the early warning signs of…

机器学习 · 计算机科学 2026-01-27 Vaskar Chakma , MD Jaheid Hasan Nerab , Abdur Rouf , Abu Sayed , Hossem MD Saim , Md. Nournabi Khan

Automatic recognition of surgical phases in surgical videos is a fundamental task in surgical workflow analysis. In this report, we propose a Transformer-based method that utilizes calibrated confidence scores for a 2-stage inference…

计算机视觉与模式识别 · 计算机科学 2022-06-16 Yunfan Li , Vinayak Shenoy , Prateek Prasanna , I. V. Ramakrishnan , Haibin Ling , Himanshu Gupta

With advancements in computer vision taking place day by day, recently a lot of light is being shed on activity recognition. With the range for real-world applications utilizing this field of study increasing across a multitude of…

计算机视觉与模式识别 · 计算机科学 2022-10-20 Love Trivedi , Raviit Vij

Various and ubiquitous information systems are being used in monitoring, exchanging, and collecting information. These systems are generating massive amount of event sequence logs that may help us understand underlying phenomenon. By…

机器学习 · 统计学 2018-07-13 Yihuang Kang , Vladimir Zadorozhny

Generative models have achieved remarkable progress with the emergence of flow matching (FM). It has demonstrated strong generative capabilities and attracted significant attention as a simulation-free flow-based framework capable of…

计算机视觉与模式识别 · 计算机科学 2026-04-01 Huynh Trinh Ngoc , Hoang Anh Nguyen Kim , Toan Nguyen Hai , Long Tran Quoc

Hidden Markov models and their variants are the predominant sequential classification method in such domains as speech recognition, bioinformatics and natural language processing. Being generative rather than discriminative models, however,…

机器学习 · 统计学 2013-02-18 John A. Quinn , Masashi Sugiyama