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Machine Learning (ML) is increasingly being used for computer aided diagnosis of brain related disorders based on structural magnetic resonance imaging (MRI) data. Most of such work employs biologically and medically meaningful hand-crafted…

机器学习 · 计算机科学 2018-05-04 Ayush Jaiswal , Dong Guo , Cauligi S. Raghavendra , Paul Thompson

We introduce a new method for training deep Boltzmann machines jointly. Prior methods of training DBMs require an initial learning pass that trains the model greedily, one layer at a time, or do not perform well on classification tasks. In…

机器学习 · 统计学 2013-05-02 Ian J. Goodfellow , Aaron Courville , Yoshua Bengio

Recently, deep neural networks (DNNs) have been the subject of intense research for the classification of radio frequency (RF) signals, such as synthetic aperture radar (SAR) imagery or micro-Doppler signatures. However, a fundamental…

信号处理 · 电气工程与系统科学 2018-11-21 Mehmet Saygin Seyfioglu , Baris Erol , Sevgi Zubeyde Gurbuz , Moeness G. Amin

Metagenomics characterizes the taxonomic diversity of microbial communities by sequencing DNA directly from an environmental sample. One of the main challenges in metagenomics data analysis is the binning step, where each sequenced read is…

定量方法 · 定量生物学 2015-05-27 Kévin Vervier , Pierre Mahé , Maud Tournoud , Jean-Baptiste Veyrieras , Jean-Philippe Vert

We propose a probabilistic model for interpreting gene expression levels that are observed through single-cell RNA sequencing. In the model, each cell has a low-dimensional latent representation. Additional latent variables account for…

机器学习 · 计算机科学 2018-01-18 Romain Lopez , Jeffrey Regier , Michael Cole , Michael Jordan , Nir Yosef

Brain-inspired deep predictive coding networks (DPCNs) effectively model and capture video features through a bi-directional information flow, even without labels. They are based on an overcomplete description of video scenes, and one of…

计算机视觉与模式识别 · 计算机科学 2024-09-10 Wenqian Xue , Chi Ding , Jose Principe

Deep learning methods have advanced quickly in brain imaging analysis over the past few years, but they are usually restricted by the limited labeled data. Pre-trained model on unlabeled data has presented promising improvement in feature…

神经元与认知 · 定量生物学 2024-08-22 Jinlong Hu , Yangmin Huang , Nan Wang , Shoubin Dong

Knowledge of molecular subtypes of gliomas can provide valuable information for tailored therapies. This study aimed to investigate the use of deep convolutional neural networks (DCNNs) for noninvasive glioma subtyping with radiological…

图像与视频处理 · 电气工程与系统科学 2022-03-14 Dong Wei , Yiming Li , Yinyan Wang , Tianyi Qian , Yefeng Zheng

This study proposes a novel biologically-motivated learning method for deep convolutional neural networks (CNNs). The combination of CNNs and back propagation (BP) learning is the most powerful method in recent machine learning regimes.…

神经与进化计算 · 计算机科学 2020-01-07 Takashi Shinozaki

Gene Regulatory Networks (GRNs) are intricate biological systems that control gene expression and regulation in response to environmental and developmental cues. Advances in computational biology, coupled with high throughput sequencing…

机器学习 · 计算机科学 2025-04-18 Akshata Hegde , Tom Nguyen , Jianlin Cheng

Discriminative features play an important role in image and object classification and also in other fields of research such as semi-supervised learning, fine-grained classification, out of distribution detection. Inspired by Linear…

计算机视觉与模式识别 · 计算机科学 2021-07-14 Mai Lan Ha , Gianni Franchi , Emanuel Aldea , Volker Blanz

Phase-Based Ranging (PBR) offers several advantages for estimating distances between wirelessly connected devices, including high accuracy over large distances and the removal of the need for antenna arrays at each transceiver. This study…

信号处理 · 电气工程与系统科学 2025-11-26 Pantelis Stefanakis , Ming Shen

Automated recognition and classification of bacteria species from microscopic images have significant importance in clinical microbiology. Bacteria classification is usually carried out manually by biologists using different shapes and…

定量方法 · 定量生物学 2019-12-19 Muhammed Talo

We propose a deep learning methodology for multivariate regression that is based on pattern recognition that triggers fast learning over sensor data. We used a conversion of sensors-to-image which enables us to take advantage of Computer…

计算机视觉与模式识别 · 计算机科学 2022-03-11 Jiztom Kavalakkatt Francis , Chandan Kumar , Jansel Herrera-Gerena , Kundan Kumar , Matthew J Darr

Composed of amino acid chains that influence how they fold and thus dictating their function and features, proteins are a class of macromolecules that play a central role in major biological processes and are required for the structure,…

定量方法 · 定量生物学 2022-07-15 Aaron Wang

One of the main goals of developmental biology is to reveal the gene regulatory networks (GRNs) underlying the robust differentiation of multipotent progenitors into precisely specified cell types. Most existing methods to infer GRNs from…

定量方法 · 定量生物学 2024-01-23 Maria Mircea , Diego Garlaschelli , Stefan Semrau

Consider a Dirichlet process mixture model (DPM) with random precision parameter $\alpha$, inducing $K_n$ clusters over $n$ observations through its latent random partition. Our goal is to specify the prior distribution…

统计方法学 · 统计学 2025-06-03 Carlo Vicentini , Ian Hyla Jermyn

Standard deep neural networks (DNNs) are commonly trained in an end-to-end fashion for specific tasks such as object recognition, face identification, or character recognition, among many examples. This specificity often leads to…

计算机视觉与模式识别 · 计算机科学 2020-07-14 Raphaël Achddou , J. Matias di Martino , Guillermo Sapiro

Deep neural network (DNN) models have demonstrated impressive performance in various domains, yet their application in cognitive neuroscience is limited due to their lack of interpretability. In this study we employ two structurally…

信号处理 · 电气工程与系统科学 2024-09-04 Murat Kucukosmanoglu , Javier O. Garcia , Justin Brooks , Kanika Bansal

The remarkable performance of overparameterized deep neural networks (DNNs) must arise from an interplay between network architecture, training algorithms, and structure in the data. To disentangle these three components, we apply a…

机器学习 · 计算机科学 2025-07-09 Chris Mingard , Henry Rees , Guillermo Valle-Pérez , Ard A. Louis