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Semantic segmentation of microscopy cell images by deep learning is a significant technique. We considered that the Transformers, which have recently outperformed CNNs in image recognition, could also be improved and developed for cell…

计算机视觉与模式识别 · 计算机科学 2026-04-29 Hinako Mitsuoka , Kazuhiro Hotta

This paper addresses the automatic image segmentation problem in a region merging style. With an initially over-segmented image, in which the many regions (or super-pixels) with homogeneous color are detected, image segmentation is…

计算机视觉与模式识别 · 计算机科学 2015-05-20 Bo Peng , Lei Zhang , David Zhang

We present a method combining affinity prediction with region agglomeration, which improves significantly upon the state of the art of neuron segmentation from electron microscopy (EM) in accuracy and scalability. Our method consists of a…

计算机视觉与模式识别 · 计算机科学 2020-07-29 Jan Funke , Fabian David Tschopp , William Grisaitis , Arlo Sheridan , Chandan Singh , Stephan Saalfeld , Srinivas C. Turaga

Convolutional neural networks (CNNs) have shown promising results on several segmentation tasks in magnetic resonance (MR) images. However, the accuracy of CNNs may degrade severely when segmenting images acquired with different scanners…

机器学习 · 统计学 2018-05-28 Neerav Karani , Krishna Chaitanya , Christian Baumgartner , Ender Konukoglu

We present two practical improvement techniques for unsupervised segmentation learning. These techniques address limitations in the resolution and accuracy of predicted segmentation maps of recent state-of-the-art methods. Firstly, we…

计算机视觉与模式识别 · 计算机科学 2024-12-02 Alp Eren Sari , Francesco Locatello , Paolo Favaro

Semantic segmentation is an important task that helps autonomous vehicles understand their surroundings and navigate safely. During deployment, even the most mature segmentation models are vulnerable to various external factors that can…

计算机视觉与模式识别 · 计算机科学 2021-09-29 Quazi Marufur Rahman , Niko Sünderhauf , Peter Corke , Feras Dayoub

Medical image segmentation is usually regarded as one of the most important intermediate steps in clinical situations and medical imaging research. Thus, accurately assessing the segmentation quality of the automatically generated…

图像与视频处理 · 电气工程与系统科学 2022-01-19 Zhenxi Zhang , Chunna Tian , Jie Li , Zhusi Zhong , Zhicheng Jiao , Xinbo Gao

Automatic segmentation of head and neck tumors plays an important role in radiomics analysis. In this short paper, we propose an automatic segmentation method for head and neck tumors from PET and CT images based on the combination of…

图像与视频处理 · 电气工程与系统科学 2020-12-29 Jun Ma , Xiaoping Yang

Reconstructing the intricate local morphology of neurons and their long-range projecting axons can address many connectivity related questions in neuroscience. The main bottleneck in connectomics pipelines is correcting topological errors,…

计算机视觉与模式识别 · 计算机科学 2025-03-05 Anna Grim , Jayaram Chandrashekar , Uygar Sumbul

In this paper, we propose a method to improve prediction accuracy of semantic segmentation methods as follows: (1) construct a neural network that has pre-processing layers based on a convolutional autoencoder ahead of a semantic…

计算机视觉与模式识别 · 计算机科学 2024-07-10 Hisashi Shimodaira

This paper presents a method for automatic segmentation, localization, and identification of vertebrae in arbitrary 3D CT images. Many previous works do not perform the three tasks simultaneously even though requiring a priori knowledge of…

图像与视频处理 · 电气工程与系统科学 2020-10-01 Naoto Masuzawa , Yoshiro Kitamura , Keigo Nakamura , Satoshi Iizuka , Edgar Simo-Serra

Deep convolutional neural networks for image segmentation do not learn the label structure explicitly and may produce segmentations with an incorrect structure, e.g., with disconnected cylindrical structures in the segmentation of tree-like…

图像与视频处理 · 电气工程与系统科学 2022-10-11 Shuai Chen , Antonio Garcia-Uceda , Jiahang Su , Gijs van Tulder , Lennard Wolff , Theo van Walsum , Marleen de Bruijne

Deep learning has been used to improve photoacoustic (PA) image reconstruction. One major challenge is that errors cannot be quantified to validate predictions when ground truth is unknown. Validation is key to quantitative applications,…

图像与视频处理 · 电气工程与系统科学 2024-07-04 Ruibo Shang , Geoffrey P. Luke , Matthew O'Donnell

In recent years, deep learning methods have outperformed other methods in image recognition. This has fostered imagination of potential application of deep learning technology including safety relevant applications like the interpretation…

计算机视觉与模式识别 · 计算机科学 2019-12-10 Matthias Rottmann , Kira Maag , Robin Chan , Fabian Hüger , Peter Schlicht , Hanno Gottschalk

In the field of connectomics, neuroscientists seek to identify cortical connectivity comprehensively. Neuronal boundary detection from the Electron Microscopy (EM) images is often done to assist the automatic reconstruction of neuronal…

计算机视觉与模式识别 · 计算机科学 2017-08-01 Wei Shen , Bin Wang , Yuan Jiang , Yan Wang , Alan Yuille

Semantic segmentation networks are usually pre-trained once and not updated during deployment. As a consequence, misclassifications commonly occur if the distribution of the training data deviates from the one encountered during the robot's…

机器人学 · 计算机科学 2023-02-15 Jonas Frey , Hermann Blum , Francesco Milano , Roland Siegwart , Cesar Cadena

We introduce an approach to integrate segmentation information within a convolutional neural network (CNN). This counter-acts the tendency of CNNs to smooth information across regions and increases their spatial precision. To obtain…

计算机视觉与模式识别 · 计算机科学 2017-08-16 Adam W. Harley , Konstantinos G. Derpanis , Iasonas Kokkinos

It is well-known in image processing that computational cost increases rapidly with the number and dimensions of the images to be processed. Several fields, such as medical imaging, routinely use numerous very large images, which might also…

计算机视觉与模式识别 · 计算机科学 2016-05-24 Fares Al-Qunaieer , Hamid R. Tizhoosh , Shahryar Rahnamayan

Medical images used in clinical practice are heterogeneous and not the same quality as scans studied in academic research. Preprocessing breaks down in extreme cases when anatomy, artifacts, or imaging parameters are unusual or protocols…

图像与视频处理 · 电气工程与系统科学 2022-08-31 Mostafa Mehdipour Ghazi , Mads Nielsen

The automated analysis of microscopy images is a challenge in the context of single-cell tracking and quantification. This work has as goals the study of the performance of deep learning for segmenting microscopy images and the improvement…

定量方法 · 定量生物学 2022-10-05 André O. Françani