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相关论文: *K-means and Cluster Models for Cancer Signatures

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We apply our statistically deterministic machine learning/clustering algorithm *K-means (recently developed in https://ssrn.com/abstract=2908286) to 10,656 published exome samples for 32 cancer types. A majority of cancer types exhibit…

基因组学 · 定量生物学 2017-08-16 Zura Kakushadze , Willie Yu

We present a novel method for extracting cancer signatures by applying statistical risk models (http://ssrn.com/abstract=2732453) from quantitative finance to cancer genome data. Using 1389 whole genome sequenced samples from 14 cancers, we…

基因组学 · 定量生物学 2017-01-24 Zura Kakushadze , Willie Yu

One of the applications of center-based clustering algorithms such as K-Means is partitioning data points into K clusters. In some examples, the feature space relates to the underlying problem we are trying to solve, and sometimes we can…

机器学习 · 计算机科学 2020-09-23 Ali Hassani , Amir Iranmanesh , Mahdi Eftekhari , Abbas Salemi

Clustering is a widely used and powerful machine learning technique, but its effectiveness is often limited by the need to specify the number of clusters, k, or by relying on thresholds that implicitly determine k. We introduce k*-means, a…

机器学习 · 计算机科学 2025-05-20 Louis Mahon , Mirella Lapata

Gene expression profiles are essential in identifying different cancer phenotypes. Clustering gene expression datasets can provide accurate identification of cancerous cell lines, but this task is challenging due to the small sample size…

生物物理 · 物理学 2023-05-30 Yuchen Wu , Luke Dicks , David J. Wales

We combine K-means clustering with the least-squares kernel classification method. K-means clustering is used to extract a set of representative vectors for each class. The least-squares kernel method uses these representative vectors as a…

机器学习 · 计算机科学 2020-12-25 M. Andrecut

The recent framework of compressive statistical learning aims at designing tractable learning algorithms that use only a heavily compressed representation-or sketch-of massive datasets. Compressive K-Means (CKM) is such a method: it…

机器学习 · 计算机科学 2018-08-01 Vincent Schellekens , Laurent Jacques

The K-means algorithm is arguably the most popular data clustering method, commonly applied to processed datasets in some "feature spaces", as is in spectral clustering. Highly sensitive to initializations, however, K-means encounters a…

机器学习 · 计算机科学 2019-06-04 Feiyu Chen , Yuchen Yang , Liwei Xu , Taiping Zhang , Yin Zhang

The k-means algorithm is a partitional clustering method. Over 60 years old, it has been successfully used for a variety of problems. The popularity of k-means is in large part a consequence of its simplicity and efficiency. In this paper…

计算机视觉与模式识别 · 计算机科学 2013-06-11 Ognjen Arandjelovic

Feature selection is an important and challenging task in high dimensional clustering. For example, in genomics, there may only be a small number of genes that are differentially expressed, which are informative to the overall clustering…

统计方法学 · 统计学 2019-10-07 Xiangrui Zeng , Hongyu Zheng

K-means (MacQueen, 1967) [1] is one of the simplest unsupervised learning algorithms that solve the well-known clustering problem. The procedure follows a simple and easy way to classify a given data set to a predefined, say K number of…

机器学习 · 计算机科学 2017-06-23 Srikanta Kolay , Kumar Sankar Ray , Abhoy Chand Mondal

Clustering methods are popular for revealing structure in data, particularly in the high-dimensional setting common to contemporary data science. A central statistical question is, "are the clusters really there?" One pioneering method in…

统计方法学 · 统计学 2023-08-28 Thomas H. Keefe , J. S. Marron

Comparison of three kind of the clustering and find cost function and loss function and calculate them. Error rate of the clustering methods and how to calculate the error percentage always be one on the important factor for evaluating the…

机器学习 · 计算机科学 2014-11-14 Kamran Kowsari

Kernel $k$-means clustering can correctly identify and extract a far more varied collection of cluster structures than the linear $k$-means clustering algorithm. However, kernel $k$-means clustering is computationally expensive when the…

机器学习 · 计算机科学 2019-02-12 Shusen Wang , Alex Gittens , Michael W. Mahoney

A new cluster analysis method, $K$-quantiles clustering, is introduced. $K$-quantiles clustering can be computed by a simple greedy algorithm in the style of the classical Lloyd's algorithm for $K$-means. It can be applied to large and…

统计方法学 · 统计学 2019-11-12 Christian Hennig , Cinzia Viroli , Laura Anderlucci

This paper shows that one can be competitive with the k-means objective while operating online. In this model, the algorithm receives vectors v_1,...,v_n one by one in an arbitrary order. For each vector the algorithm outputs a cluster…

数据结构与算法 · 计算机科学 2015-02-24 Edo Liberty , Ram Sriharsha , Maxim Sviridenko

Clustering samples according to an effective metric and/or vector space representation is a challenging unsupervised learning task with a wide spectrum of applications. Among several clustering algorithms, k-means and its kernelized version…

分布式、并行与集群计算 · 计算机科学 2017-10-10 Marco Jacopo Ferrarotti , Sergio Decherchi , Walter Rocchia

The analysis of continously larger datasets is a task of major importance in a wide variety of scientific fields. In this sense, cluster analysis algorithms are a key element of exploratory data analysis, due to their easiness in the…

机器学习 · 统计学 2018-01-10 Marco Capó , Aritz Pérez , Jose A. Lozano

k-means has recently been recognized as one of the best algorithms for clustering unsupervised data. Since k-means depends mainly on distance calculation between all data points and the centers, the time cost will be high when the size of…

数据结构与算法 · 计算机科学 2011-08-08 Raied Salman , Vojislav Kecman , Qi Li , Robert Strack , Erik Test

K-means clustering is widely used in psychological and psychometric research to identify profiles, subgroups, and potential typologies, yet its classical formulation does not test whether such groups exist as latent psychological…

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