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Modeling the spontaneous evolution of morphology in natural systems and its preservation by proportionate growth remains a major scientific challenge. Yet, it is conceivable that if the basic mechanisms of growth and the coupled kinetic…

软凝聚态物质 · 物理学 2020-12-30 Virginia von Streng , Rami Abi-Akl , Bianca Giovanardi , Tal Cohen

The process of morphogenesis, which can be defined as an evolution of the form of an organism, is one of the most intriguing mysteries in the life sciences. It is clear, that gene expression patterns cannot explain the development of the…

其他定量生物学 · 定量生物学 2013-07-23 Nadya Morozova , Mikhail Shubin

Morphoelasticity represents a foundational theory for tracing back growth, remodelling, and morphogenesis, yet crucial challenges persist. A unified growth law -- independent of a priori assumptions about constitutive relations or specified…

软凝聚态物质 · 物理学 2025-07-29 Angelo Rosario Carotenuto , Stefania Palumbo , Arsenio Cutolo , Massimiliano Fraldi

Among the main actors of organism development there are morphogens, which are signaling molecules diffusing in the developing organism and acting on cells to produce local responses. Growth is thus determined by the distribution of such…

最优化与控制 · 数学 2016-09-21 Francesco Rossi , Nastassia Pouradier Duteil , Nir Yakoby , Benedetto Piccoli

Understanding the rules underlying organismal development is a major unsolved problem in biology. Each cell in a developing organism responds to signals in its local environment by dividing, excreting, consuming, or reorganizing, yet how…

细胞行为 · 定量生物学 2025-08-20 Ramya Deshpande , Francesco Mottes , Ariana-Dalia Vlad , Michael P. Brenner , Alma dal Co

Search for possible relationships between phylogeny and ontogeny is one of the most important issues in the field of evolutionary developmental biology. By representing developmental dynamics of spatially located cells with gene expression…

种群与进化 · 定量生物学 2015-04-01 Takahiro Kohsokabe , Kunihiko Kaneko

Based on a non-equilibrium mechanism for spatial pattern formation we study how position information can be controlled by locally coupled discrete dynamical networks, similar to gene regulation networks of cells in a developing…

分子网络 · 定量生物学 2009-08-26 Thimo Rohlf , Stefan Bornholdt

The formation of self-organized patterns is key to the morphogenesis of multicellular organisms, although a comprehensive theory of biological pattern formation is still lacking. Here, we propose a minimal model combining tissue mechanics…

生物物理 · 物理学 2022-06-08 P. Recho , A. Hallou , E. Hannezo

A macroscopic theory for describing cellular states during steady-growth is presented, which is based on the consistency between cellular growth and molecular replication, as well as the robustness of phenotypes against perturbations.…

种群与进化 · 定量生物学 2021-02-08 Kunihiko Kaneko , Chikara Furusawa

The present view of biological phenomena is based on a biochemical paradigm that development of living organisms is defined by information stored in a molecular form as some genetic code. However, new discoveries indicate that biological…

其他定量生物学 · 定量生物学 2023-11-14 Yuri K. Shestopaloff

Morphogenesis is the ensemble of processes that determines form, shape and patterns in organisms. Based on a reaction-diffusion theoretical setting and some prototype reaction schemes, we make a review of the models and experiments that…

细胞行为 · 定量生物学 2007-05-23 Rui Dilao

Space-saving design is a requirement that is encountered in biological systems and the development of modern technological devices alike. Many living organisms dynamically pack their polymer chains, filaments or membranes inside of…

软凝聚态物质 · 物理学 2014-07-18 Roman Vetter , Falk K. Wittel , Hans J. Herrmann

A fundamental task in developmental biology is to identify the mechanisms which drive morphogenesis. In many cases, pattern formation is driven by the positional information determined by both the gradient of maternal factors and hard-wired…

分子网络 · 定量生物学 2007-05-23 L. Diambra , Luciano da Fontoura Costa

How does growth encode form in developing organisms? Many different spatiotemporal growth profiles may sculpt tissues into the same target 3D shapes, but only specific growth patterns are observed in animal and plant development. In…

软凝聚态物质 · 物理学 2023-02-16 Dillon J. Cislo , Anastasios Pavlopoulos , Boris I. Shraiman

Embryonic development involves pattern formation characterized by the emergence of spatially localized domains characterized by distinct cell fates resulting from differential gene expression. The boundaries demarcating these domains are…

组织与器官 · 定量生物学 2024-06-11 Chandrashekar Kuyyamudi , Shakti N. Menon , Sitabhra Sinha

Morphogenesis, the process by which an adult organism emerges from a single cell, has fascinated humans for a long time. Modelling this process can provide novel insights into development and the principles that orchestrate the…

组织与器官 · 定量生物学 2018-06-13 M. D. Peters , L. D. Wittwer , A. Stopka , D. Barac , C. Lang , D. Iber

Brain morphology is shaped by genetic and mechanical factors and is linked to biological development and diseases. Its fractal-like features, regional anisotropy, and complex curvature distributions hinder quantitative insights in medical…

神经元与认知 · 定量生物学 2025-09-09 Yingjie Zhao , Yicheng Song , Fan Xu , Zhiping Xu

Evolution and development operate at different timescales; generations for the one, a lifetime for the other. These two processes, the basis of much of life on earth, interact in many non-trivial ways, but their temporal hierarchy --…

神经与进化计算 · 计算机科学 2022-01-20 Fabien C. Y. Benureau , Jun Tani

Proteins control many vital functions in living cells, such as cell growth and cell division. Reliable coordination of these functions requires the spatial and temporal organizaton of proteins inside cells, which encodes information about…

生物物理 · 物理学 2022-02-22 Tom Burkart , Manon C. Wigbers , Laeschkir Würthner , Erwin Frey

Intracellular protein patterns govern essential cellular functions by dynamically redistributing proteins between membrane-bound and cytosolic states, conserving their total numbers. This review presents a theoretical framework for…

生物物理 · 物理学 2025-12-16 Erwin Frey , Henrik Weyer
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