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Microorganisms navigate through fluid, often confined by complex environments, to survive and sustain life. Inspired by this fact, we consider a model system and seek to understand the wall curvature driven dynamics of a squirmer, a…

软凝聚态物质 · 物理学 2021-08-25 Chaithanya K. V. S. , Sumesh P. Thampi

Various microorganisms and some mammalian cells are able to swim in viscous fluids by performing nonreciprocal body deformations, such as rotating attached flagella or by distorting their entire body. In order to perform chemotaxis, i.e. to…

生物物理 · 物理学 2021-05-06 Benedikt Hartl , Maximilian Hübl , Gerhard Kahl , Andreas Zöttl

In this paper, we describe the unification and extension of multiple kinematic theories on the advection of colloidal particles through periodic obstacle lattices of arbitrary geometry and infinitesimally small obstacle size. We focus…

计算物理 · 物理学 2020-03-25 Arnaldo Rodriguez-Gonzalez , Jason P. Gleghorn , Brian J. Kirby

We study the trajectories of a model microorganism inside three-dimensional channels with square and rectangular cross-sections. Using (i) numerical simulations based on lattice-Boltzmann method, and (ii) analytical expressions using…

软凝聚态物质 · 物理学 2024-08-16 Byjesh N. Radhakrishnan , Ahana Purushothaman , Ranabir Dey , Sumesh P Thampi

In nature, many unicellular organisms are able to swim with the help of beating filaments, where local energy input leads to cooperative undulatory beating motion. Here, we investigate by employing reinforcement learning how undulatory…

生物物理 · 物理学 2025-11-04 Fumiya Tokoro , Hideki Takayama , Shinji Deguchi , Andreas Zöttl , Daiki Matsunaga

Thin cylindrical membranes arise in a wide variety of biological systems ranging from tubular structures on and within cell membranes to in-vitro experiments on artificial vesicles. Motor proteins embedded in such fluidic membranes often…

流体动力学 · 物理学 2025-07-09 Udaya Maurya , Surya Teja Gavva , Arpan Saha , Rickmoy Samanta

The swimming of a deformable planar slab in a viscous incompressible fluid is studied on the basis of the Navier-Stokes equations. A continuum of plane wave displacements, symmetric on both sides of the slab and characterized by a…

流体动力学 · 物理学 2016-11-08 B. U. Felderhof

Fluids with internal microstructure like dense suspensions, biological and polymer added fluids, are commonly found in the turbulent regime in many applications. Their flow is extremely difficult to be studied as microstructure complexity…

流体动力学 · 物理学 2020-11-11 G. Sofiadis , I. E. Sarris

We use high-speed x-ray imaging to reveal how a small (~10cm) desert dwelling lizard, the sandfish (Scincus scincus), swims within a granular medium [1]. On the surface, the lizard uses a standard diagonal gait, but once below the surface,…

流体动力学 · 物理学 2009-10-20 Ryan D. Maladen , Yang Ding , Adam Kamor , Daniel I. Goldman

We simulate by lattice Boltzmann the nonequilibrium steady states of run-and-tumble particles (inspired by a minimal model of bacteria), interacting by far-field hydrodynamics, subject to confinement. Under gravity, hydrodynamic…

统计力学 · 物理学 2010-07-01 R. W. Nash , R. Adhikari , J. Tailleur , M. E. Cates

We use numerical simulations to systematically investigate the vesicle dynamics in two-dimensional (2D) Taylor-Green vortex flow in the absence of inertial forces. Vesicles are highly deformable membranes encapsulating an incompressible…

生物物理 · 物理学 2023-05-10 Gökberk Kabacaoğlu , Enkeleida Lushi

The hydrodynamics of a flagellated microorganism is investigated when swimming close to a planar free-slip surface by means of numerical solu- tions of the Stokes equations obtained via a Boundary Element Method. Depending on the initial…

流体动力学 · 物理学 2017-03-31 Daniela Pimponi , Mauro Chinappi , Paolo Gualtieri , Carlo Massimo Casciola

Fluidic transport in inverted T-shaped cavities with the flow entering through the top and exiting from the two bottom outlets experiences an interesting phenomenon that causes particles having density lower than that of the fluid medium to…

流体动力学 · 物理学 2022-11-15 Sneham Das , Saikat Basu

Recent numerical analyses to optimize the design of microfluidic devices for more effective entrapment or segregation of surrogate circulating tumor cells (CTCs) from healthy cells have been reported in the literature without concurrently…

计算物理 · 物理学 2020-06-23 Hakan Başağaoğlu , Justin Blount , Sauro Succi , Christopher J. Freitas

The time dynamics of flagellar and ciliary beating is often neglected in theories of microswimmers, with the most common models prescribing a time-constant actuation of the surrounding fluid. By explicitly introducing a metachronal wave,…

软凝聚态物质 · 物理学 2026-01-19 G. C. Antunes , H. Stark

The motion of microorganisms in their natural habitat is strongly influenced by their propulsion mechanisms, geometrical constraints, and random fluctuations. Here, we study numerically the first-passage-time (FPT) statistics of…

软凝聚态物质 · 物理学 2025-09-19 Yanis Baouche , Magali Le Goff , Thomas Franosch , Christina Kurzthaler

We study the transport of bacteria in a porous media modeled by a square channel containing one cylindrical obstacle via molecular dynamics simulations coupled to a lattice Boltzmann fluid. Our bacteria model is a rod-shaped rigid body…

软凝聚态物质 · 物理学 2020-11-30 Miru Lee , Christoph Lohrmann , Kai Szuttor , Harold Auradou , Christian Holm

Inertial fluid flow deformation around pillars in a microchannel is a new method for controlling fluid flow. Sequences of pillars have been shown to produce a rich phase space with a wide variety of flow transformations. Previous work has…

流体动力学 · 物理学 2016-07-28 Daniel Stoecklein , Chueh-Yu Wu , Donghyuk Kim , Dino Di Carlo , Baskar Ganapathysubramanian

The transition to turbulence in Taylor-Couette flow often occurs via a sequence of supercritical bifurcations to progressively more complex, yet stable, flows. We describe a subcritical laminar-turbulent transition in the counter-rotating…

We study two microswimmers consisting of a spherical rigid head and a passive elastic tail. In the first one the tail is clamped to the head, and the system oscillates under the action of an external torque. In the second one, head and tail…

流体动力学 · 物理学 2017-02-02 Giancarlo Cicconofri , Antonio DeSimone