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"Secrete-and-sense cells" can communicate by secreting a signaling molecule while also producing a receptor that detects the molecule. The cell can potentially "talk" to itself ("self-communication") or talk to neighboring cells with the…

细胞行为 · 定量生物学 2017-08-10 Berkalp A. Doğaner , Lawrence K. Q. Yan , Hyun Youk

In biological cells and novel diagnostic devices biochemical receptors need to be sensitive to extremely small concentration changes of signaling molecules. The accuracy of such molecular signaling is ultimately limited by the counting…

亚细胞过程 · 定量生物学 2023-04-06 Aljaz Godec , Ralf Metzler

How cells reliably infer information about their environment is a fundamentally important question. While sensing and signaling generally start with cell-surface receptors, the degree of accuracy with which a cell can measure external…

生物物理 · 物理学 2016-01-20 Gerardo Aquino , Ned S. Wingreen , Robert G. Endres

Intercellular signaling has an important role in organism development, but not all communication occurs using the same mechanism. Here, we analyze the energy efficiency of intercellular signaling by two canonical mechanisms: diffusion of…

定量方法 · 定量生物学 2022-11-30 Hyunjoong Kim , Yoichiro Mori , Joshua B. Plotkin

Biological cells are able to accurately sense chemicals with receptors at their surfaces, allowing cells to move towards sources of attractant and away from sources of repellent. The accuracy of sensing chemical concentration is ultimately…

亚细胞过程 · 定量生物学 2015-05-14 Robert G. Endres , Ned S. Wingreen

Cells adapt to changing environments by sensing ligand concentrations using specific receptors. The accuracy of sensing is ultimately limited by the finite number of ligand molecules bound by receptors. Previously derived physical limits to…

亚细胞过程 · 定量生物学 2019-11-13 Thierry Mora , Ilya Nemenman

Gradient sensing requires at least two measurements at different points in space. These measurements must then be communicated to a common location to be compared, which is unavoidably noisy. While much is known about the limits of…

分子网络 · 定量生物学 2016-04-27 Andrew Mugler , Andre Levchenko , Ilya Nemenman

Inter and intra-cellular signaling are essential for individual cells to execute various physiological tasks and accurately respond to changes in their environment. Signaling is carried out via diffusible molecules, the transport of which…

软凝聚态物质 · 物理学 2020-10-13 Sumantra Sarkar , Sandeep Choubey

Living cells presumably employ optimized information transfer methods, enabling efficient communication even in noisy environments. As expected, the efficiency of chemical communications between cells depends on the properties of the…

Cells respond to chemical cues, and the precision with which they can sense these cues is fundamentally limited by the stochastic nature of diffusion and ligand binding. Berg and Purcell famously investigated how well a small sensor in an…

生物物理 · 物理学 2025-03-21 Daniel R. McCusker , David K. Lubensky

Autologous chemotaxis, in which cells secrete and detect molecules to determine the direction of fluid flow, is thwarted at high cell density because molecules from other cells interfere with a given cell's signal. Using a minimal model of…

生物物理 · 物理学 2022-09-14 Michael Vennettilli , Louis Gonzalez , Nicholas Hilgert , Andrew Mugler

Artificially engineered biosensors are highly inefficient in accurately measuring the concentration of biomarkers, particularly, during early diagnosis of diseases. On the other hand, single cellular systems such as chemotactic bacteria can…

生物物理 · 物理学 2019-07-12 Tuhin Chakrabortty , Manoj M Varma

Berg and Purcell [Biophys. J. 20, 193 (1977)] calculated how the accuracy of concentration sensing by single-celled organisms is limited by noise from the small number of counted molecules. Here we generalize their results to the sensing of…

分子网络 · 定量生物学 2011-11-28 Thierry Mora , Ned S. Wingreen

Living cells deploy many resources to sense their environments, including receptors, downstream signaling molecules, time and fuel. However, it is not known which resources fundamentally limit the precision of sensing, like weak links in a…

分子网络 · 定量生物学 2014-01-31 Christopher C. Govern , Pieter Rein ten Wolde

To adapt their behaviour in changing environments, cells sense concentrations by binding external ligands to their receptors. However, incorrect ligands may bind nonspecifically to receptors, and when their concentration is large, this…

分子网络 · 定量生物学 2015-07-23 Thierry Mora

We typically think of cells as responding to external signals independently by regulating their gene expression levels, yet they often locally exchange information and coordinate. Can such spatial coupling be of benefit for conveying…

分子网络 · 定量生物学 2015-01-19 Thomas R. Sokolowski , Gašper Tkačik

Biological cells are often found to sense their chemical environment near the single-molecule detection limit. Surprisingly, this precision is higher than simple estimates of the fundamental physical limit, hinting towards active sensing…

生物物理 · 物理学 2015-11-06 Gerardo Aquino , Luke Tweedy , Doris Heinrich , Robert G. Endres

Many eukaryotic cells are able to sense chemical gradients by directly measuring spatial concentration differences. The precision of such gradient sensing is limited by fluctuations in the binding of diffusing particles to specific…

细胞行为 · 定量生物学 2010-06-04 Bo Hu , Wen Chen , Wouter-Jan Rappel , Herbert Levine

A model of autocrine signaling in cultures of suspended cells is developed on the basis of the effective medium approximation. The fraction of autocrine ligands, the mean and distribution of distances traveled by paracrine ligands before…

定量方法 · 定量生物学 2009-11-13 Mathieu Coppey , Alexander M. Berezhkovskii , Stuart C. Sealfon , Stanislav Y. Shvartsman

Eukaryotic cells sense chemical gradients to decide where and when to move. Clusters of cells can sense gradients more accurately than individual cells by integrating measurements of the concentration made across the cluster. Is this…

细胞行为 · 定量生物学 2021-10-22 Emiliano Perez Ipiña , Brian A. Camley
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