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Active particles such as swimming bacteria or self-propelled colloids are known to spontaneously organize into fascinating large-scale dynamic structures. The emergence of these collective states from the motility pattern of the individual…

软凝聚态物质 · 物理学 2019-11-20 Hamid Karan , Gerardo E. Pradillo , Petia M. Vlahovska

Microorganisms can preferentially orient and move along gradients of a chemo-attractant (i.e., chemotax) while colonies of many microorganisms can collectively undergo complex dynamics in response to chemo-attractants that they themselves…

生物物理 · 物理学 2013-10-30 Enkeleida Lushi , Raymond E. Goldstein , Michael J. Shelley

The effect of crowding on the run-and-tumble dynamics of swimmers such as bacteria is studied using a discrete lattice model of mutually excluding particles that move with constant velocity along a direction that is randomized at a rate…

软凝聚态物质 · 物理学 2015-06-16 Rodrigo Soto , Ramin Golestanian

{\it E. coli} bacteria swim in straight runs interrupted by sudden reorientation events called tumbles. The resulting random walks give rise to density fluctuations that can be derived analytically in the limit of non interacting particles…

统计力学 · 物理学 2013-09-05 M. Paoluzzi , R. Di Leonardo , L. Angelani

One of simplest examples of navigation found in nature is run-and-tumble chemotaxis. Tumbles reorient cells randomly, and cells can drift toward attractants or away from repellents by biasing the frequency of these events. The post-tumble…

软凝聚态物质 · 物理学 2017-09-14 Julius B. Kirkegaard , Raymond E. Goldstein

Run-and-tumble dynamics is a wide-spread mechanism of swimming bacteria. The accumulation of run-and-tumble microswimmers near impermeable surfaces is studied theoretically and numerically in the low-density limit in two and three spatial…

统计力学 · 物理学 2015-03-29 Jens Elgeti , Gerhard Gompper

Run-and-tumble motility is widely used by swimming microorganisms including numerous prokaryotic eukaryotic organisms. Here, we experimentally investigate the run-and-tumble dynamics of the bacterium E. coli in polymeric solutions. We find…

流体动力学 · 物理学 2015-11-04 A. E. Patteson , A. Gopinath , M. Goulian , P. E. Arratia

In micro-swimmer suspensions locomotion necessarily generates fluid motion, and it is known that such flows can lead to collective behavior from unbiased swimming. We examine the complementary problem of how chemotaxis is affected by…

生物物理 · 物理学 2012-10-23 Enkeleida Lushi , Raymond E. Goldstein , Michael J. Shelley

In their search for metabolic resources microbes swim through viscous environments that present physical anisotropies, including steric obstacles across a wide range of sizes. Hydrodynamic forces are known to significantly alter swimmer…

软凝聚态物质 · 物理学 2020-07-03 Kentaro Hoeger , Tristan Ursell

A hallmark of bacteria is their so-called "run-and-tumble" motion, consisting of a sequence of linear directed "runs" and random rotations that constantly alternate due to biochemical feedback. It plays a crucial role in the ability of…

软凝聚态物质 · 物理学 2024-02-21 Gordei Anchutkin , Viktor Holubec , Frank Cichos

Biological microswimmers often encounter deformable boundaries in physiological conditions; for instance, the viscoelastic walls of reproductive tract during migration of spermatozoa, or host tissue during early bacterial biofilm formation.…

软凝聚态物质 · 物理学 2025-08-07 Smita S. Sontakke , Aneesha Kajampady , Mohd Suhail Rizvi , Ranabir Dey

Active propulsion, as performed by bacteria and Janus particles, in combination with hydrodynamic interaction results in the accumulation of bacteria at a flat wall. However, in microfluidic devices with cylindrical pillars of sufficiently…

生物物理 · 物理学 2024-04-15 Theresa Jakuszeit , Ottavio A. Croze

Various microorganisms and some mammalian cells are able to swim in viscous fluids by performing nonreciprocal body deformations, such as rotating attached flagella or by distorting their entire body. In order to perform chemotaxis, i.e. to…

生物物理 · 物理学 2021-05-06 Benedikt Hartl , Maximilian Hübl , Gerhard Kahl , Andreas Zöttl

Several recent experiments investigate the orientational and transport behavior of self-driven bacteria and colloidal particles in nematic liquid crystals. Correspondingly, we study theoretically the dynamics of a minimal model microswimmer…

软凝聚态物质 · 物理学 2022-10-28 Abdallah Daddi-Moussa-Ider , Andreas M. Menzel

In our article we present a computational model for the simulation of self-propelled anisotropic bacteria. To this end we use a self-propelled particle model and augment it with a statistical algorithm for the run-and-tumble motion. We…

软凝聚态物质 · 物理学 2020-06-17 Miru Lee , Kai Szuttor , Christian Holm

We study the detention statistics of self-propelling droplet microswimmers attaching to microfluidic pillars. These droplets show negative autochemotaxis: they shed a persistent repulsive trail of spent fuel that biases them to detach from…

软凝聚态物质 · 物理学 2019-10-30 Chenyu Jin , Jérémy Vachier , Soumya Bandyopadhyay , Tamara Macharashvili , Corinna C. Maass

We simulate by lattice Boltzmann the nonequilibrium steady states of run-and-tumble particles (inspired by a minimal model of bacteria), interacting by far-field hydrodynamics, subject to confinement. Under gravity, hydrodynamic…

统计力学 · 物理学 2010-07-01 R. W. Nash , R. Adhikari , J. Tailleur , M. E. Cates

Chemotactic active particles, such as bacteria and cells, exhibit an adaptive run-and-tumble motion, giving rise to complex emergent behaviors in response to external chemical fields. This motion is generated by the conversion of internal…

软凝聚态物质 · 物理学 2024-02-06 Minh D. N. Nguyen , Phuc H. Pham , Khang V. Ngo , Van H. Do , Shengkai Li , Trung V. Phan

Natural habitats of most living microorganisms are distinguished by a complex structure often formed by a porous medium such as soil. The dynamics and transport properties of motile microorganisms are strongly affected by crowded and…

软凝聚态物质 · 物理学 2023-06-23 Florian von Rüling , Liubov Bakhchova , Ulrike Steinmann , Alexey Eremin

Magnetotactic swimmers tend to align along magnetic field lines against stochastic reorientations. We show that the swimming strategy, e.g. active Brownian motion versus run-and-tumble dynamics, strongly affects the orientation statistics.…

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