相关论文: Approximation hardness of Shortest Common Superstr…

In this paper, we study for the first time the Diverse Longest Common Subsequences (LCSs) problem under Hamming distance. Given a set of a constant number of input strings, the problem asks to decide if there exists some subset $\mathcal X$…

We study the problem of indexing text with wildcard positions, motivated by the challenge of aligning sequencing data to large genomes that contain millions of single nucleotide polymorphisms (SNPs)---positions known to differ between…

Consensus problems for strings and sequences appear in numerous application contexts, ranging from bioinformatics over data mining to machine learning. Closing some gaps in the literature, we show that several fundamental problems in this…

Generalizations of plain strings have been proposed as a compact way to represent a collection of nearly identical sequences or to express uncertainty at specific text positions by enumerating all possibilities. While a plain string stores…

In this paper, we consider a generalized longest common subsequence problem with multiple substring exclusion constrains. For the two input sequences $X$ and $Y$ of lengths $n$ and $m$, and a set of $d$ constrains $P=\{P_1,...,P_d\}$ of…

We propose a new conjecture on hardness of low-degree $2$-CSP's, and show that new hardness of approximation results for Densest $k$-Subgraph and several other problems, including a graph partitioning problem, and a variation of the Graph…

The minimum circuit size problem (MCSP) is a string compression problem with a parameter $s$ in which, given the truth table of a Boolean function over inputs of length $n$, one must answer whether it can be computed by a Boolean circuit of…

We propose to reduce the original well-posed problem of compressive sensing to weighted-MAX-SAT. Compressive sensing is a novel randomized data acquisition approach that linearly samples sparse or compressible signals at a rate much below…

The notion of code sparsification was introduced by Khanna, Putterman and Sudan (arxiv.2311.00788), as an analogue to the the more established notion of cut sparsification in graphs and hypergraphs. In particular, for $\alpha\in (0,1)$ an…

In a connected simple graph G = (V(G),E(G)), each vertex is assigned one of c colors, where V(G) can be written as a union of a total of c subsets V_{1},...,V_{c} and V_{i} denotes the set of vertices of color i. A subset S of V(G) is…

In this note we investigate the complexity of the Minimum Label Alignment problem and we show that such a problem is APX-hard.

The Surjective Constraint Satisfaction Problem (SCSP) is the problem of deciding whether there exists a surjective assignment to a set of variables subject to some specified constraints, where a surjective assignment is an assignment…

The efficient sparse coding and reconstruction of signal vectors via linear observations has received a tremendous amount of attention over the last decade. In this context, the automated learning of a suitable basis or overcomplete…

We investigate the constrained synchronization problem for weakly acyclic, or partially ordered, input automata. We show that, for input automata of this type, the problem is always in NP. Furthermore, we give a full classification of the…

We study the recently introduced problem of finding dense common subgraphs: Given a sequence of graphs that share the same vertex set, the goal is to find a subset of vertices $S$ that maximizes some aggregate measure of the density of the…

A forcing set $S$ in a combinatorial problem is a set of elements such that there is a unique solution that contains all the elements in $S$. An anti-forcing set is the symmetric concept: a set $S$ of elements is called an anti-forcing set…

We prove the #P-hardness of the counting problems associated with various satisfiability, graph and combinatorial problems, when restricted to planar instances. These problems include \begin{romannum} \item[{}] {\sc 3Sat, 1-3Sat, 1-Ex3Sat,…

This paper analyzes to what extent it is possible to efficiently reduce the number of clauses in NP-hard satisfiability problems, without changing the answer. Upper and lower bounds are established using the concept of kernelization.…

We prove that for an arbitrarily small constant $\eps>0,$ assuming NP$\not \subseteq$DTIME$(2^{{\log^{O(1/\eps)} n}})$, the preprocessing versions of the closest vector problem and the nearest codeword problem are hard to approximate within…

Given a set of $k$ strings $I$, their longest common subsequence (LCS) is the string with the maximum length that is a subset of all the strings in $I$. A data-structure for this problem preprocesses $I$ into a data-structure such that the…