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The proposed article aims at offering a comprehensive tutorial for the computational aspects of structured matrix and tensor factorization. Unlike existing tutorials that mainly focus on {\it algorithmic procedures} for a small set of…

信号处理 · 电气工程与系统科学 2023-07-19 Xiao Fu , Nico Vervliet , Lieven De Lathauwer , Kejun Huang , Nicolas Gillis

A fundamental problem in network analysis is clustering the nodes into groups which share a similar connectivity pattern. Existing algorithms for community detection assume the knowledge of the number of clusters or estimate it a priori…

统计方法学 · 统计学 2018-03-30 Junxian Geng , Anirban Bhattacharya , Debdeep Pati

Bayesian variable selection regression (BVSR) is able to jointly analyze genome-wide genetic datasets, but the slow computation via Markov chain Monte Carlo (MCMC) hampered its wide-spread usage. Here we present a novel iterative method to…

统计计算 · 统计学 2018-07-31 Quan Zhou , Yongtao Guan

The likelihood-free sequential Approximate Bayesian Computation (ABC) algorithms, are increasingly popular inference tools for complex biological models. Such algorithms proceed by constructing a succession of probability distributions over…

统计计算 · 统计学 2012-10-12 Daniel Silk , Saran Filippi , Michael P. H. Stumpf

We introduce a tensor-based clustering method to extract sparse, low-dimensional structure from high-dimensional, multi-indexed datasets. This framework is designed to enable detection of clusters of data in the presence of structural…

定量方法 · 定量生物学 2019-02-11 Anna Seigal , Mariano Beguerisse-Díaz , Birgit Schoeberl , Mario Niepel , Heather A. Harrington

The objective of clustering is to discover natural groups in datasets and to identify geometrical structures which might reside there, without assuming any prior knowledge on the characteristics of the data. The problem can be seen as…

计算几何 · 计算机科学 2018-01-26 Luis-Evaristo Caraballo , José-Miguel Díaz-Báñez , Nadine Kroher

Learning the structure of a Bayesian Network (BN) with score-based solutions involves exploring the search space of possible graphs and moving towards the graph that maximises a given objective function. Some algorithms offer exact…

机器学习 · 计算机科学 2022-05-03 Anthony C. Constantinou , Yang Liu , Neville K. Kitson , Kiattikun Chobtham , Zhigao Guo

Using the maximum entropy method, we derive the "adaptive cluster expansion" (ACE), which can be trained to estimate probability density functions in high dimensional spaces. The main advantage of ACE over other Bayesian networks is its…

神经与进化计算 · 计算机科学 2007-05-23 Stephen Luttrell

This paper studies the statistical and computational limits of high-order clustering with planted structures. We focus on two clustering models, constant high-order clustering (CHC) and rank-one higher-order clustering (ROHC), and study the…

统计理论 · 数学 2023-10-04 Yuetian Luo , Anru R. Zhang

A robust clustering method for probabilities in Wasserstein space is introduced. This new "trimmed $k$-barycenters" approach relies on recent results on barycenters in Wasserstein space that allow intensive computation, as required by…

统计方法学 · 统计学 2019-02-06 E. del Barrio , J. A. Cuesta-Albertos , C. Matrán , A. Mayo-Íscar

Tree structures appear in many fields of the life sciences, including phylogenetics, developmental biology and nucleic acid structures. Trees can be used to represent RNA secondary structures, which directly relate to the function of…

机器学习 · 计算机科学 2026-01-22 Pengyu Liu , Mariel Vázquez , Nataša Jonoska

Subspace clustering refers to the problem of clustering high-dimensional data points into a union of low-dimensional linear subspaces, where the number of subspaces, their dimensions and orientations are all unknown. In this paper, we…

机器学习 · 统计学 2014-03-17 Reinhard Heckel , Eirikur Agustsson , Helmut Bölcskei

In many modern applications, there is interest in analyzing enormous data sets that cannot be easily moved across computers or loaded into memory on a single computer. In such settings, it is very common to be interested in clustering.…

统计计算 · 统计学 2020-05-15 Hanyu Song , Yingjian Wang , David B. Dunson

Tensor train (TT) decomposition, a powerful tool for analyzing multidimensional data, exhibits superior performance in many machine learning tasks. However, existing methods for TT decomposition either suffer from noise overfitting, or…

信号处理 · 电气工程与系统科学 2023-06-27 Le Xu , Lei Cheng , Ngai Wong , Yik-Chung Wu

We develop the theory and practice of an approach to modelling and probabilistic inference in causal networks that is suitable when application-specific or analysis-specific constraints should inform such inference or when little or no data…

人工智能 · 计算机科学 2017-05-16 Paul Beaumont , Michael Huth

A new maximum approximate likelihood (ML) estimation algorithm for the mixture of Kent distribution is proposed. The new algorithm is constructed via the BSLM (block successive lower-bound maximization) framework and incorporates manifold…

统计计算 · 统计学 2017-09-15 Hien D. Nguyen

In recent years dynamical modelling has been provided with a range of breakthrough methods to perform exact Bayesian inference. However it is often computationally unfeasible to apply exact statistical methodologies in the context of large…

统计计算 · 统计学 2014-12-24 Umberto Picchini , Julie Lyng Forman

A major challenge in cluster analysis is that the number of data clusters is mostly unknown and it must be estimated prior to clustering the observed data. In real-world applications, the observed data is often subject to heavy tailed noise…

机器学习 · 统计学 2020-05-06 Freweyni K. Teklehaymanot , Michael Muma , Abdelhak M. Zoubir

As the size $n$ of datasets become massive, many commonly-used clustering algorithms (for example, $k$-means or hierarchical agglomerative clustering (HAC) require prohibitive computational cost and memory. In this paper, we propose a…

A least squares semi-supervised local clustering algorithm based on the idea of compressed sensing is proposed to extract clusters from a graph with known adjacency matrix. The algorithm is based on a two-stage approach similar to the one…

机器学习 · 计算机科学 2022-11-01 Ming-Jun Lai , Zhaiming Shen