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The extraction of biomedical data has significant academic and practical value in contemporary biomedical sciences. In recent years, drug repositioning, a cost-effective strategy for drug development by discovering new indications for…

机器学习 · 计算机科学 2025-01-20 Enqiang Zhu , Xiang Li , Chanjuan Liu , Nikhil R. Pal

Deep learning became the method of choice in recent year for solving a wide variety of predictive analytics tasks. For sequence prediction, recurrent neural networks (RNN) are often the go-to architecture for exploiting sequential…

机器学习 · 计算机科学 2016-11-09 Kin Gwn Lore , Daniel Stoecklein , Michael Davies , Baskar Ganapathysubramanian , Soumik Sarkar

Deep Convolutional Neural Networks (DCNNs) are currently popular in human activity recognition applications. However, in the face of modern artificial intelligence sensor-based games, many research achievements cannot be practically applied…

机器学习 · 计算机科学 2018-12-05 Zhan Yang , Osolo Ian Raymond , ChengYuan Zhang , Ying Wan , Jun Long

Early detection is a crucial goal in the study of Alzheimer's Disease (AD). In this work, we describe several techniques to boost the performance of 3D deep convolutional neural networks (CNNs) trained to detect AD using structural brain…

图像与视频处理 · 电气工程与系统科学 2020-04-07 Sheng Liu , Chhavi Yadav , Carlos Fernandez-Granda , Narges Razavian

With the recent advances in machine learning for quantum chemistry, it is now possible to predict the chemical properties of compounds and to generate novel molecules. Existing generative models mostly use a string- or graph-based…

生物大分子 · 定量生物学 2020-10-14 Vitali Nesterov , Mario Wieser , Volker Roth

We present a new Deep Dictionary Learning and Coding Network (DDLCN) for image recognition tasks with limited data. The proposed DDLCN has most of the standard deep learning layers (e.g., input/output, pooling, fully connected, etc.), but…

计算机视觉与模式识别 · 计算机科学 2020-05-25 Hao Tang , Hong Liu , Wei Xiao , Nicu Sebe

Adverse drug reaction (ADR) prediction plays a crucial role in both health care and drug discovery for reducing patient mortality and enhancing drug safety. Recently, many studies have been devoted to effectively predict the drug-ADRs…

信息检索 · 计算机科学 2023-08-08 Haoxuan Li , Taojun Hu , Zetong Xiong , Chunyuan Zheng , Fuli Feng , Xiangnan He , Xiao-Hua Zhou

Prediction and discovery of new materials with desired properties are at the forefront of quantum science and technology research. A major bottleneck in this field is the computational resources and time complexity related to finding new…

The emergence of deep learning (DL) has provided great opportunities for the high-throughput analysis of atomic-resolution micrographs. However, the DL models trained by image patches in fixed size generally lack efficiency and flexibility…

At present, the vast majority of building blocks, techniques, and architectures for deep learning are based on real-valued operations and representations. However, recent work on recurrent neural networks and older fundamental theoretical…

As proteins with similar structures often have similar functions, analysis of protein structures can help predict protein functions and is thus important. We consider the problem of protein structure classification, which computationally…

机器学习 · 统计学 2019-10-08 Hongyu Guo , Khalique Newaz , Scott Emrich , Tijana Milenkovic , Jun Li

Convolution has been the core ingredient of modern neural networks, triggering the surge of deep learning in vision. In this work, we rethink the inherent principles of standard convolution for vision tasks, specifically spatial-agnostic…

计算机视觉与模式识别 · 计算机科学 2021-04-13 Duo Li , Jie Hu , Changhu Wang , Xiangtai Li , Qi She , Lei Zhu , Tong Zhang , Qifeng Chen

Predicting materials properties from composition or structure is of great interest to the materials science community. Deep learning has recently garnered considerable interest in materials predictive tasks with low model errors when…

材料科学 · 物理学 2021-11-01 Chi Chen , Shyue Ping Ong

Understanding the morphological changes of primary neuronal cells induced by chemical compounds is essential for drug discovery. Using the data from a single high-throughput imaging assay, a classification model for predicting the…

图像与视频处理 · 电气工程与系统科学 2019-09-02 Andrey Kormilitzin , Xinyu Yang , William H. Stone , Caroline Woffindale , Francesca Nicholls , Elena Ribe , Alejo Nevado-Holgado , Noel Buckley

We present a technique for developing a network of re-used features, where the topology is formed using a coarse learning method, that allows gradient-descent fine tuning, known as an Abstract Deep Network (ADN). New features are built…

神经与进化计算 · 计算机科学 2014-12-17 Anthony Knittel , Alan Blair

Convolutional neural networks (CNNs) are one of the most popular models of Artificial Neural Networks (ANN)s in Computer Vision (CV). A variety of CNN-based structures were developed by researchers to solve problems like image…

计算机视觉与模式识别 · 计算机科学 2022-09-30 Bowen Qiu , Daniela Raicu , Jacob Furst , Roselyne Tchoua

Molecular structure has important applications in many fields. For example, some studies show that molecular spatial information can be used to achieve better prediction results when predicting molecular properties. However, traditional…

化学物理 · 物理学 2022-03-14 Xiaohui Lin , Yongquan Jiang , Yan Yang

Early diagnosis, playing an important role in preventing progress and treating the Alzheimer\{'}s disease (AD), is based on classification of features extracted from brain images. The features have to accurately capture main AD-related…

机器学习 · 计算机科学 2016-11-15 Ehsan Hosseini-Asl , Robert Keynto , Ayman El-Baz

The olfactory system employs responses of an ensemble of odorant receptors (ORs) to sense molecules and to generate olfactory percepts. Here we hypothesized that ORs can be viewed as 3D spatial filters that extract molecular features…

机器学习 · 计算机科学 2024-12-13 Sergey Shuvaev , Khue Tran , Khristina Samoilova , Cyrille Mascart , Alexei Koulakov

A novel convolution neural network model, abbreviated NL-CNN is proposed, where nonlinear convolution is emulated in a cascade of convolution + nonlinearity layers. The code for its implementation and some trained models are made publicly…

机器学习 · 计算机科学 2021-02-03 Radu Dogaru , Ioana Dogaru