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We investigate the motion of active semiflexible filament with shape kinematics and hydrodynamic interaction including. Three types of filament motion are found: Translation, snaking and rotation. Change of flexibility will induce…

软凝聚态物质 · 物理学 2012-10-24 Huijun Jiang , Zhonghuai Hou

We describe the effect of hydrodynamic interactions in the sedimentation of a pair of inextensible semiflexible filaments under a uniform constant force at low Reynolds numbers. We have analyzed the different regimes and the morphology of…

软凝聚态物质 · 物理学 2009-11-13 Isaac Llopis , Ignacio Pagonabarraga , Marco Cosentino Lagomarsino , Christopher P. Lowe

We describe simulations of a microscopic elastic filament immersed in a fluid and subject to a uniform external force. Our method accounts for the hydrodynamic coupling between the flow generated by the filament and the friction force it…

软凝聚态物质 · 物理学 2009-11-11 M. Cosentino Lagomarsino , I. Pagonabarraga , C. P. Lowe

Active semiflexible filaments are crucial in various biophysical processes, yet insights into their single-filament behavior have predominantly relied on theory and simulations, owing to the scarcity of controllable synthetic systems. Here,…

软凝聚态物质 · 物理学 2025-07-14 Bipul Biswas , Prasanna More , Hima Nagamanasa Kandula

We explore the impact of hydrodynamic interactions on the conformational and dynamical properties of wet tangentially-driven active polymers using multiparticle collision dynamics simulations. By analyzing active filaments with varying…

软凝聚态物质 · 物理学 2024-10-24 Loek van Steijn , Mohammad Fazelzadeh , Sara Jabbari-Farouji

The collective behavior of active semiflexible filaments is studied with a model of tangentially driven self-propelled worm-like chains. The combination of excluded-volume interactions and self-propulsion leads to several distinct dynamic…

生物物理 · 物理学 2024-06-03 Ozer Duman , Rolf E. Isele-Holder , Jens Elgeti , Gerhard Gompper

We investigate structural and dynamical properties of a self-propelled filament using coarse-grained Brownian dynamics simulations. A self-propulsion force is applied along the bond vectors, i.e., tangent to the filament and their locations…

软凝聚态物质 · 物理学 2019-02-14 Shalabh K. Anand , Sunil P. Singh

We analyze experimentally the shape of a long elastic filament rotating in a viscous liquid. We identify a continuous but sharp transition from a straight to an helical shape, resulting from the competition between viscous stresses and…

流体动力学 · 物理学 2009-11-13 Naïs Coq , Olivia Du Roure , Joel Marthelot , Denis Bartolo , Marc Fermigier

We present a novel method to investigate the dynamics of a single semiflexible polymer, subject to anisotropic friction in a viscous fluid. In contrast to previous approaches, we do not rely on a discrete bead-rod model, but introduce a…

生物大分子 · 定量生物学 2009-11-13 Tobias Munk , Oskar Hallatschek , Chris H. Wiggins , Erwin Frey

The nonlinear dynamics of an elastic filament that is forced to rotate at its base is studied by hydrodynamic simulation techniques; coupling between stretch, bend, twist elasticity and thermal fluctuations is included. The…

软凝聚态物质 · 物理学 2008-03-24 Hirofumi Wada , Roland R. Netz

The dynamics of a flexible filament sedimenting in a viscous fluid are explored analytically and numerically. Compared to the well-studied case of sedimenting rigid rods, the introduction of filament compliance is shown to cause a…

流体动力学 · 物理学 2013-11-04 Lei Li , Harishankar Manikantan , David Saintillan , Saverio E. Spagnolie

Recent theoretical works exploring the hydrodynamics of soft material in non-equilibrium situations are reviewed. We discuss the role of hydrodynamic interactions for three different systems: i) the deformation and orientation of…

软凝聚态物质 · 物理学 2012-03-08 Manoel Manghi , Xaver Schlagberger , Yong-Woon Kim , Roland R. Netz

We present a generalisation of efficient numerical frameworks for modelling fluid-filament interactions via the discretisation of a recently-developed, non-local integral equation formulation to incorporate regularised Stokeslets with…

流体动力学 · 物理学 2019-10-02 Benjamin J. Walker , Kenta Ishimoto , Hermes Gadêlha , Eamonn A. Gaffney

We present a general theoretical analysis of semiflexible filaments subject to viscous drag or point forcing. These are the relevant forces in dynamic experiments designed to measure biopolymer bending moduli. By analogy with the ``Stokes…

软凝聚态物质 · 物理学 2009-10-30 Chris H. Wiggins , Daniel X. Riveline , Albrecht Ott , Raymond E. Goldstein

Using nonequilibrium computer simulations, we study the response of ferromagnetic nanofilaments, consisting of stabilized onedimensional chains of ferromagnetic nanoparticles, under external rotating magnetic fields. In difference with…

软凝聚态物质 · 物理学 2024-10-07 Pedro A. Sánchez , Antonio Cerrato , Joan J. Cerdà , Carles Bona-Cases , Tomás Sintes , Joan Massó

We investigate the dynamics of a single semiflexible filament, under the action of a compressing force, using numerical simulations and scaling arguments. The force is applied along the end to end vector at one extremity of the filament,…

软凝聚态物质 · 物理学 2009-11-07 P. Ranjith , P. B. Sunil Kumar

We consider an explicit model of a semiflexible filament moving in two dimensions on a gliding assay of motor proteins, which attach to and detach from filament segments stochastically, with a detachment rate that depends on the local load…

软凝聚态物质 · 物理学 2019-05-23 Nisha Gupta , Abhishek Chaudhuri , Debasish Chaudhuri

We simulate the nonlocal Stokesian hydrodynamics of an elastic filament which is active due a permanent distribution of stresslets along its contour. A bending instability of an initially straight filament spontaneously breaks flow symmetry…

Hydrodynamic equations for an isotropic solution of active polar filaments are derived from a microscopic mean-field model of the forces exchanged between motors and filaments. We find that a spatial dependence of the motor stepping rate…

软凝聚态物质 · 物理学 2015-06-24 T. B. Liverpool , M. Cristina Marchetti

Over the past decade, autophoretic colloids have emerged as a prototypical system for studying self-propelled motion at microscopic scales, with promising applications in microfluidics, micromachinery, and therapeutics. Their motion in a…

软凝聚态物质 · 物理学 2026-05-19 Ursy Makanga , Akhil Varma , Panayiota Katsamba
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