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We investigate the motion of two overlapping polymers with self-avoidance confined in a narrow 2d box. A statistical model is constructed using blob free-energy arguments. We find spontaneous segregation under the condition: $L > R_{//}$,…

生物物理 · 物理学 2012-11-20 Ya Liu , Bulbul Chakraborty

We demonstrate scaffolding of plasmonic nanoparticles by topological defects induced by colloidal microspheres to match their surface boundary conditions with a uniform far-field alignment in a liquid crystal host. Displacing energetically…

A minimalist simulation model for lipid bilayers is presented. Each lipid is represented by a flexible chain of beads in implicit solvent. The hydrophobic effect is mimicked through an intermolecular pair potential localized at the…

统计力学 · 物理学 2009-11-11 Grace Brannigan , Peter F. Philips , Frank L. H. Brown

We propose a simple seedless approach to assemble millimeter sized monolayer single colloidal crystals with desired orientations at predetermined locations on an unstructured charged substrate. This approach utilizes the millimeter-ranged…

软凝聚态物质 · 物理学 2018-03-09 Ran Niu , Thomas Palberg

Lipid vesicles appear ubiquitously in biological systems. Understanding how the mechanical and intermolecular interations deform vesicle membrane is a fundamental question in biophysics. In this article we developed a fast algorithm to…

数值分析 · 数学 2014-11-17 Michael Mikucki , Y. C. Zhou

Peptides are ubiquitous and important biologically derived molecules, that have been found to self-assemble to form a wide array of structures. Extensive research has explored the impacts of both internal chemical composition and external…

软凝聚态物质 · 物理学 2024-11-11 Zhenze Yang , Sarah K. Yorke , Tuomas P. J. Knowles , Markus J. Buehler

Biomembranes, primarily composed of lipid bilayers, are not merely passive barriers but dynamic and complex materials whose shapes are governed by the principles of soft matter physics. This review explores the shape problem in biomembranes…

计算物理 · 物理学 2026-05-05 Zhong-Can Ou-Yang , Tao Xu

A new theoretical approach is described for the inverse self-assembly problem, i.e., the reconstruction of the interparticle interaction from a given structure. This theory is based on the variational principle for the functional that is…

软凝聚态物质 · 物理学 2015-04-10 Masashi Torikai

Cellular functions are established through biological evolution, but are constrained by the laws of physics. For instance, the physics of protein folding limits the lengths of cellular polypeptide chains. Consequently, many cellular…

生物物理 · 物理学 2019-07-09 Pablo Sartori , Stanislas Leibler

We propose a two-body spherically symmetric (isotropic) potential such that particles interacting by the potential self assemble into linear semiflexible polymeric chains without branching. By suitable control of the potential parameters we…

软凝聚态物质 · 物理学 2018-05-09 Alex Abraham , Apratim Chatterji

Morphological transitions of phase separation associated with the asymmetry of lipid composition were investigated using micrometer-sized vesicles of lipid bilayers made from a lipid mixture. The complete macro-phase-separated morphology…

生物物理 · 物理学 2015-04-14 Shunsuke F. Shimobayashi , Masatoshi Ichikawa , Takashi Taniguchi

A critical step in tissue engineering is the design and synthesis of 3D biocompatible matrices (scaffolds) to support and guide the proliferation of cells and tissue growth. Most existing techniques rely on the processing of scaffolds under…

软凝聚态物质 · 物理学 2020-06-16 C. S. Dias , C. A. Custodio , G. C. Antunes , M. M. Telo da Gama , J. F. Mano , N. A. M. Araujo

Bilayer membranes self-assembled from amphiphilic molecules such as lipids, surfactants and block copolymers are ubiquitous in biological and physiochemical systems. The shape and structure of bilayer membranes depend crucially on their…

软凝聚态物质 · 物理学 2016-01-20 Pingwen Zhang , An-Chang Shi

Viscosity is a key property of cell membranes that controls mobility of embedded proteins and membrane remodeling. Measuring it is challenging because existing approaches involve complex experimental designs and/or models, and the…

软凝聚态物质 · 物理学 2023-07-19 Hammad A. Faizi , Rumiana Dimova , Petia M. Vlahovska

The algorithmic self-assembly of shapes has been considered in several models of self-assembly. For the problem of \emph{shape construction}, we consider an extended version of the Two-Handed Tile Assembly Model (2HAM), which contains…

计算几何 · 计算机科学 2016-08-18 Austin Luchsinger , Robert Schweller , Tim Wylie

The two-dimensional one-component plasma at the special coupling \beta = 2 is known to be exactly solvable, for its free energy and all of its correlations, on a variety of surfaces and with various boundary conditions. Here we study this…

数学物理 · 物理学 2016-11-25 Jonit Fischmann , Peter J. Forrester

Complex colloidal cluster morphologies are desirable for the fabrication of advanced materials, such as photonic crystals and meta-materials, and can be formed through evaporation-driven packing. By coupling lattice Boltzmann and discrete…

软凝聚态物质 · 物理学 2026-05-07 Junyu Yang , Abhinav Naga , Xitong Zhang , Halim Kusumaatmaja

Cell plasma membranes display a dramatically rich structural complexity characterized by functional sub-wavelength domains with specific lipid and protein composition. Under favorable experimental conditions, patterned morphologies can also…

软凝聚态物质 · 物理学 2018-10-02 Nicolas Destainville , Manoel Manghi , Julie Cornet

We have formulated a theory of self-assembly based on the notion of local gauge invariance at the mesoscale. Local gauge invariance at the mesoscale generates the required long- range entropic forces responsible for self-assembly in binary…

软凝聚态物质 · 物理学 2007-05-23 Shirish M. Chitanvis

Self-assembly is ubiquitous in nature, particularly in biology, where it underlies the formation of protein quaternary structure and protein aggregation. Quaternary structure assembles deterministically and performs a wide range of…

新兴技术 · 计算机科学 2016-04-27 S. Tesoro , S. E. Ahnert