相关论文: The rectilinear Steiner tree problem with given to…
Given a set of terminals in 2D/3D, the network with the shortest total length that connects all terminals is a Steiner tree. On the other hand, with enough budget, every terminal can be connected to every other terminals via a straight…
In this paper, we present an exact algorithm for the Steiner tree problem. The algorithm is based on certain pre-computed index structures. Our algorithm offers a practical solution for the Steiner tree problems on graphs of large size and…
We show that under mild assumptions for a problem whose solutions admit a dynamic programming-like recurrence relation, we can still find a solution under additional packing constraints, which need to be satisfied approximately. The number…
The Steiner tree problem is a classical NP-hard optimization problem with a wide range of practical applications. In an instance of this problem, we are given an undirected graph G=(V,E), a set of terminals R, and non-negative costs c_e for…
In the Directed Steiner Tree (DST) problem the input is a directed edge-weighted graph $G=(V,E)$, a root vertex $r$ and a set $S \subseteq V$ of $k$ terminals. The goal is to find a min-cost subgraph that connects $r$ to each of the…
A common problem in phylogenetics is to try to infer a species phylogeny from gene trees. We consider different variants of this problem. The first variant, called Unrestricted Minimal Episodes Inference, aims at inferring a species tree…
The largest common embeddable subtree problem asks for the largest possible tree embeddable into two input trees and generalizes the classical maximum common subtree problem. Several variants of the problem in labeled and unlabeled rooted…
This paper optimizes path planning for a trunkand-branch topology network in an irregular 2-dimensional manifold embedded in 3-dimensional Euclidean space with application to submarine cable network planning. We go beyond our earlier focus…
For a metric graph $G=(V,E)$ and $R\subset V$, the internal Steiner minimum tree problem asks for a minimum weight Steiner tree spanning $R$ such that every vertex in $R$ is not a leaf. This note shows a simple polynomial-time…
Given a metric space on n points, an {\alpha}-approximate universal algorithm for the Steiner tree problem outputs a distribution over rooted spanning trees such that for any subset X of vertices containing the root, the expected cost of…
We are interested in the design of robust (or resilient) capacitated rooted Steiner networks in case of terminals with uniform demands. Formally, we are given a graph, capacity and cost functions on the edges, a root, a subset of nodes…
Given two rooted, ordered, and labeled trees $P$ and $T$ the tree inclusion problem is to determine if $P$ can be obtained from $T$ by deleting nodes in $T$. This problem has recently been recognized as an important query primitive in XML…
We introduce and study a novel problem of computing a shortest path tree with a minimum number of non-terminals. It can be viewed as an (unweighted) Steiner Shortest Path Tree (SSPT) that spans a given set of terminal vertices by shortest…
In this experimental study we consider Steiner tree approximations that guarantee a constant approximation of ratio smaller than $2$. The considered greedy algorithms and approaches based on linear programming involve the incorporation of…
This paper provides an optimized cable path planning solution for a tree-topology network in an irregular 2D manifold in a 3D Euclidean space, with an application to the planning of submarine cable networks. Our solution method is based on…
We achieve a (randomized) polynomial-time approximation scheme (PTAS) for the Steiner Forest Problem in doubling metrics. Before our work, a PTAS is given only for the Euclidean plane in [FOCS 2008: Borradaile, Klein and Mathieu]. Our PTAS…
Steiner Tree Packing (STP) is a notoriously hard problem in classical complexity theory, which is of practical relevance to VLSI circuit design. Previous research has approached this problem by providing heuristic or approximate algorithms.…
In this paper, we consider Steiner forest and its generalizations, prize-collecting Steiner forest and k-Steiner forest, when the vertices of the input graph are points in the Euclidean plane and the lengths are Euclidean distances. First,…
Dynamic programming on tree decompositions is a frequently used approach to solve otherwise intractable problems on instances of small treewidth. In recent work by Bodlaender et al., it was shown that for many connectivity problems, there…
Phylogenetic trees canonically arise as embeddings of phylogenetic networks. We recently showed that the problem of deciding if two phylogenetic networks embed the same sets of phylogenetic trees is computationally hard, \blue{in…