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The deformation of an elastic micro-capsule in an infinite shear flow is studied numerically using a spectral method. The shape of the capsule and the hydrodynamic flow field are expanded into smooth basis functions. Analytic expressions…

软凝聚态物质 · 物理学 2008-09-03 S. Kessler , R. Finken , U. Seifert

Bacteria in biofilms form complex structures and can collectively migrate within mobile aggregates, which is referred to as swarming. This behavior is influenced by a combination of various factors, including morphological characteristics…

软凝聚态物质 · 物理学 2024-01-19 Bohan Wu-Zhang , Dmitry A. Fedosov , Gerhard Gompper

The spherical alga Volvox swims by means of flagella on thousands of surface somatic cells. This geometry and its large size make it a model organism for studying the fluid dynamics of multicellularity. Remarkably, when two nearby Volvox…

When an ensemble of particles interact hydrodynamically, they generically display large-scale transient structures such as swirls in sedimenting particles [1], or colloidal strings in sheared suspensions [2]. Understanding these…

软凝聚态物质 · 物理学 2013-01-24 Nicolas Desreumaux , Jean-Baptiste Caussin , Raphael Jeanneret , Eric Lauga , Denis Bartolo

Flagellar-driven locomotion plays a critical role in bacterial attachment and colonization of surfaces, contributing to the risks of contamination and infection. Tremendous attempts to uncover the underlying principles governing bacterial…

软凝聚态物质 · 物理学 2025-02-19 Xin-Xin Xu , Yangguang Tian , Yuhe Pu , Bingchen Che , Hao Luo , Yanan Liu , Yan-Jun Liu , Guangyin Jing

We present an analytical calculation of the hydrodynamic interaction between two spherical particles near an elastic interface such as a cell membrane. The theory predicts the frequency dependent self- and pair-mobilities accounting for the…

流体动力学 · 物理学 2016-08-03 Abdallah Daddi-Moussa-Ider , Stephan Gekle

A stochastic model is used to assess the effect of external parameters on the development of submerged biofilms on smooth and rough surfaces. The model includes basic cellular mechanisms, such as division and spreading, together with an…

软凝聚态物质 · 物理学 2024-01-17 David Rodriguez , Baldvin Einarsson , Ana Carpio

Elastic wave propagation provides a noninvasive way to probe granular materials. The discrete element method using particle configuration as input, allows a micromechanical interpretation on the acoustic response of a given granular system.…

地球物理 · 物理学 2018-08-28 Hongyang Cheng , Stefan Luding , Kuniyasu Saitoh , Vanessa Magnanimo

Many eukaryotic cells use the active waving motion of flexible flagella to self-propel in viscous fluids. However, the criteria governing the selection of particular flagellar waveforms among all possible shapes has proved elusive so far.…

生物物理 · 物理学 2013-08-02 Christophe Eloy , Eric Lauga

The motility of microorganisms is influenced greatly by their hydrodynamic interactions with the fluidic environment they inhabit. We show by direct experimental observation of the bi-flagellated alga Chlamydomonas reinhardtii that fluid…

生物物理 · 物理学 2015-11-03 Boyang Qin , Arvind Gopinath , Jing Yang , Jerry P Gollub , Paulo E Arratia

Statistical and mathematical modeling are crucial to describe, interpret, compare and predict the behavior of complex biological systems including the organization of hematopoietic stem and progenitor cells in the bone marrow environment.…

定量方法 · 定量生物学 2018-09-07 Walter de Back , Thomas Zerjatke , Ingo Roeder

We show that the flagellar beat of bull spermatozoa and Chlamydomonas Reinhardtii can be modelled by a minimal, geometrically nonlinear reaction-diffusion system. Model solutions are spatio-temporally animated patterns describing flagellar…

生物物理 · 物理学 2023-10-09 James F. Cass , Hermes Bloomfield-Gadelha

Microswimmers play an important role in shaping the world around us. The squirmer is a simple model for microswimmer whose cilia oscillations on its spherical surface induce an effective slip velocity to propel itself. The rapid development…

流体动力学 · 物理学 2024-11-22 Xinwei Cai , Kuiliang Wang , Gaojin Li , Xin Bian

The elastohydrodynamics of slender bodies in a viscous fluid have long been the source of theoretical investigation, being pertinent to the microscale world of ciliates and flagellates as well as to biological and engineered active matter…

流体动力学 · 物理学 2021-04-07 Benjamin J. Walker , Eamonn A. Gaffney

Bacteria exist in a free-swimming state or in a sessile biofilm state. The transition from free-swimming to sessile mode is characterized by changes in gene expression which alter, among others,the mechanics of flagellar motility. In this…

流体动力学 · 物理学 2014-05-07 Alan Cheng Hou Tsang , Eva Kanso

Understanding surface-driven transport is of paramount importance from the perspective of biological applications and the synthesis of microfluidic devices. In this work, we develop an analysis of a local inversion symmetry broken fluid…

流体动力学 · 物理学 2026-05-05 Aakash Anand , A. Bhattacharyay

Several micro-organisms, such as bacteria, algae, or spermatozoa, use flagella or cilia to swim in a fluid, while many other micro-organisms instead use ample shape deformation, described as amoeboid, to propel themselves by either crawling…

生物物理 · 物理学 2016-09-19 Hao Wu , A. Farutin , W. -F. Hu , M. Thiébaud , S. Rafaï , P. Peyla , M. -C. Lai , C. Misbah

We study the characteristics of fluid-fluid displacement in simple mixed-wet porous micromodels numerically using a dynamic pore network model. The porous micromodel consists of distinct water-wet and oil-wet regions, whose fractions are…

软凝聚态物质 · 物理学 2023-08-02 Ashkan Irannezhad , Bauyrzhan K. Primkulov , Ruben Juanes , Benzhong Zhao

Recent experiments suggest that the interplay between cells and the mechanics of their substrate gives rise to a diversity of morphological and migrational behaviors. Here, we develop a Cellular Potts Model of polarizing cells on a…

Biological membranes are host to proteins and molecules which may form domain-like structures resulting in spatially-varying material properties. Vesicles with such heterogeneous membranes can exhibit intricate shapes at equilibrium and…

软凝聚态物质 · 物理学 2023-06-22 Prerna Gera , David Salac , Saverio E. Spagnolie